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PLM1_60_coex_sep16_scaffold_3851

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3851_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2..331)
DNA (330bp) protein (110aa)
putative imidazolonepropionase (EC:3.5.2.7)
Amidohydrolase bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_3851_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(577..1527)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transporters inner membrane component
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3851_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1527..2444)
DNA (918bp) protein (306aa)
Dipeptide transport system permease DppB bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppB; dipeptide transport system permease DppB
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3851_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2441..3814)
DNA (1374bp) protein (458aa)
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA methyltransferase
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_3851_5
unknown

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comp(4296..5843)
DNA (1548bp) protein (516aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_3851_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5956..6171
DNA (216bp) protein (72aa)
Putative TPR domain protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3851_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6361..7674
DNA (1314bp) protein (438aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3851_trna_1
unknown

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7948..8018
DNA (71bp)
transferRNA Gln
PLM1_60_coex_sep16_scaffold_3851_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8039..8218
DNA (180bp) protein (60aa)
Ribose-phosphate pyrophosphokinase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribose-phosphate pyrophosphokinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3851_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8229..8951
DNA (723bp) protein (241aa)
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3851_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8981..9088
DNA (108bp) protein (36aa)
50S ribosomal protein L25 bin=GWC2_Methylomirabilis_70_24 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 11 items

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