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PLM1_60_coex_sep16_scaffold_8126

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_8126_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2..1270)
DNA (1269bp) protein (423aa)
Benzoate-CoA ligase family bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
benzoate--CoA ligase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_8126_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1284..2093)
DNA (810bp) protein (270aa)
Beta-lactamase domain-containing protein bin=GWC2_Methylomirabilis_70_24 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nudix hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_8126_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2090..3385)
DNA (1296bp) protein (432aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
PAS domain S-box bin=GWC2_Methylomirabilis_70_16 species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_8126_4
unknown

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3682..4287
DNA (606bp) protein (202aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_8126_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4458..5654)
DNA (1197bp) protein (399aa)
Acyl-CoA dehydrogenase domain protein bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_8126_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5779..7011
DNA (1233bp) protein (411aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family bin=GWF2_Methylomirabilis_70_14 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_8126_7
unknown

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comp(7008..7298)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_8126_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7475..7789
DNA (315bp) protein (105aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 8 items

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