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PLM1_60_coex_sep16_scaffold_4237

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_4237_1
unknown

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comp(2..196)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_4237_2
Solea senegalensis, Solea, Pleuronectiformes, Neopterygii, Chordata, Metazoa

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551..784
DNA (234bp) protein (78aa)
Calsequestrin Tax=Solea senegalensis RepID=C6L838_SOLSE
Calsequestrin {ECO:0000256|RuleBase:RU000648}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea.;" source="Solea senegalensis (Senegalese sole).;"
aspartic acid-rich protein aspolin2-1-like protein
PLM1_60_coex_sep16_scaffold_4237_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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981..1370
DNA (390bp) protein (130aa)
PF06181 domain protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4237_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1395..1985)
DNA (591bp) protein (197aa)
hypothetical protein bin=bin7_NC10_sister species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_4237_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1982..3259)
DNA (1278bp) protein (426aa)
glpC; ferredoxin bin=bin7_NC10_sister species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative fe-S oxidoreductase
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_4237_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3353..3802)
DNA (450bp) protein (150aa)
Rubrerythrin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbr; rubrerythrin
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_4237_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3861..4352)
DNA (492bp) protein (164aa)
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator bin=bin7_NC10_sister species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferric-uptake regulator
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_4237_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4482..6080
DNA (1599bp) protein (533aa)
Excinuclease ABC, subunit A bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uvrA; excinuclease ABC subunit A
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 8 items

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