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PLM1_60_coex_sep16_scaffold_4778

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_4778_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2..187)
DNA (186bp) protein (62aa)
LysR substrate-binding protein bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_4778_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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382..4956
DNA (4575bp) protein (1525aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain (NADPH-GOGAT) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM42_9BACT
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4778_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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5277..5978
DNA (702bp) protein (234aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_4778_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5975..6331
DNA (357bp) protein (119aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4778_5
unknown

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comp(6336..6863)
DNA (528bp) protein (176aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000302D6DC
PLM1_60_coex_sep16_scaffold_4778_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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6866..7360
DNA (495bp) protein (165aa)
hypothetical protein bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
metal-dependent hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_4778_7
unknown

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comp(7510..7905)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_4778_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7902..8588)
DNA (687bp) protein (229aa)
hypothetical protein bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_4778_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(8607..8783)
DNA (177bp) protein (59aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
moaA1; Molybdopterin cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 9 items

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