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PLM1_60_coex_sep16_scaffold_4797

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_4797_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..139
DNA (138bp) protein (46aa)
Putative Signal peptide peptidase SppA bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_4797_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(227..2728)
DNA (2502bp) protein (834aa)
PAS/PAC sensor hybrid histidine kinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_4797_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2725..4647)
DNA (1923bp) protein (641aa)
sensor histidine kinase protein (EC:2.7.13.3)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4797_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5660..7051)
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_4797_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7056..7910)
DNA (855bp) protein (285aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_4797_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7907..8584)
DNA (678bp) protein (226aa)
id=3526414 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_4797_7
unknown

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comp(8796..8888)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_4797_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(8885..9577)
DNA (693bp) protein (231aa)
Coenzyme A pyrophosphatase bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutT
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4797_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9624..10310)
DNA (687bp) protein (229aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-hydroxypent-2,4-dienoate hydratase (Protein belongs to CMGI-2) bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

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