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PLM1_60_coex_sep16_scaffold_7852

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_7852_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..1175)
DNA (1173bp) protein (391aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_7852_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1162..2070)
DNA (909bp) protein (303aa)
Lipid A biosynthesis acyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_7852_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2075..2848)
DNA (774bp) protein (258aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_7852_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2874..3638)
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_7852_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3963..4856)
DNA (894bp) protein (298aa)
Hypothetical membrane protein bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_7852_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4960..6096)
DNA (1137bp) protein (379aa)
3'-5' exonuclease bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3'-5' exonuclease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_7852_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6161..6928
DNA (768bp) protein (256aa)
putative short chain dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_7852_8
unknown

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6943..7194
DNA (252bp) protein (84aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_7852_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7184..7570)
DNA (387bp) protein (129aa)
Response regulator receiver bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integral membrane sensor hybrid histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_7852_10
RLO_PLX_64_10, Bacteria

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comp(7678..8100)
DNA (423bp) protein (141aa)
Two component transcriptional regulator, LuxR family bin=GWC2_Methylomirabilis_70_16 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying 10 items

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