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PLM1_60_coex_sep16_scaffold_2152

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_2152_1
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..678)
DNA (678bp) protein (226aa)
histidinol dehydrogenase Tax=Bradyrhizobium elkanii RepID=UPI00036B2697
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM1_60_coex_sep16_scaffold_2152_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(692..1477)
DNA (786bp) protein (262aa)
Putative branched-chain amino acid transport system ATP-binding protein Tax=Azospirillum brasilense Sp245 RepID=G8ALP0_AZOBR
amino acid ABC transporter ATP-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM1_60_coex_sep16_scaffold_2152_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1474..2262)
DNA (789bp) protein (263aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyacyl-CoA dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2152_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2267..3415)
DNA (1149bp) protein (383aa)
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Isovaleryl-CoA dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2152_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3524..3931)
DNA (408bp) protein (136aa)
Cobalamin B12-binding domain protein bin=GWC2_Methylomirabilis_70_24 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cobalamin B12-binding domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2152_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3931..4344)
DNA (414bp) protein (138aa)
Histidine triad (HIT) protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine triad (HIT) protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2152_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4358..5425)
DNA (1068bp) protein (356aa)
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase bin=GWC2_Methylomirabilis_70_24 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2152_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5440..7107)
DNA (1668bp) protein (556aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2152_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7124..8254)
DNA (1131bp) protein (377aa)
Acyl-CoA dehydrogenase domain protein bin=GWF2_Methylomirabilis_70_14 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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