ggKbase home page

PLM1_60_coex_sep16_scaffold_2287

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_2287_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3..257
DNA (255bp) protein (85aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
6-pyruvoyl-tetrahydropterin synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2287_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

254..817
DNA (564bp) protein (188aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
folE; GTP cyclohydrolase I (EC:3.5.4.16)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_2287_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

814..1530
DNA (717bp) protein (239aa)
Oxidoreductase, short chain dehydrogenase/reductase family bin=GWC2_Methylomirabilis_70_16 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short chain dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2287_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1628..1954
DNA (327bp) protein (109aa)
Iron-binding protein IscA (Iron-sulfur cluster assembly protein) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein)
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2287_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1983..2663
DNA (681bp) protein (227aa)
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin converting factor-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2287_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2704..4038
DNA (1335bp) protein (445aa)
tRNA(Ile)-lysidine synthase bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tRNA(Ile)-lysidine synthetase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2287_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4084..5556
DNA (1473bp) protein (491aa)
Periplasmic trypsin-like serine protease lipoprotein DegQ bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2287_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5654..7132
DNA (1479bp) protein (493aa)
Response regulator bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AtoC; response regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2287_9
unknown

Not on your lists

7597..7746
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 9 items

View Taxonomy