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PLM1_60_coex_sep16_scaffold_2891

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_2891_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..152)
DNA (150bp) protein (50aa)
Acetylornithine aminotransferase bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2891_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(149..631)
DNA (483bp) protein (161aa)
Histone acetyltransferase HPA2/related acetyltransferase bin=GWF2_Methylomirabilis_70_14 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2891_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(628..1119)
DNA (492bp) protein (164aa)
Arginine repressor bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arginine repressor
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2891_4
unknown

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1217..1789
DNA (573bp) protein (191aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_2891_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1725..3938)
DNA (2214bp) protein (738aa)
trpE; anthranilate synthase (EC:4.1.3.27)
Anthranilate synthase {ECO:0000313|EMBL:CAN95207.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CAN95207.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Anthranilate synthase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLF1_SORC5
PLM1_60_coex_sep16_scaffold_2891_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4259..5149
DNA (891bp) protein (297aa)
2-hydroxy-3-oxopropionate reductase bin=GWF2_Methylomirabilis_70_14 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxy-3-oxopropionate reductase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2891_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5146..6174
DNA (1029bp) protein (343aa)
putative acetyltransferase bin=GWF2_Methylomirabilis_70_14 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2891_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6180..6572
DNA (393bp) protein (131aa)
Copper resistance protein CopC bin=GWC2_Methylomirabilis_70_16 species=Nitrosococcus watsonii genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
copper resistance protein CopC
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2891_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6695..7963
DNA (1269bp) protein (423aa)
Copper resistance D domain protein bin=GWC2_Methylomirabilis_70_16 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
copper resistance D domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2891_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7963..9045
DNA (1083bp) protein (361aa)
Predicted protein bin=GWF2_Methylomirabilis_70_14 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADP-dependent oxidoreductase domain protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2891_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9174..9815
DNA (642bp) protein (214aa)
Lactoylglutathione lyase and related lyases bin=GWF2_Methylomirabilis_70_14 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylmalonyl-CoA epimerase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2891_12
RLO_PLX_64_10, Bacteria

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9826..10614
DNA (789bp) protein (263aa)
3-ketoacyl-ACP reductase Tax=Paenibacillus mucilaginosus RepID=I0BR71_9BACL
3-ketoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_60_coex_sep16_scaffold_2891_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10616..11026
DNA (411bp) protein (137aa)
id=3030719 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2891_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10975..12234)
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2891_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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12259..12405
DNA (147bp) protein (49aa)
molybdopterin-binding iron-sulfur cluster-binding oxidoreductase MopB-3 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
molybdopterin oxidoreductase
Tax=CSP1_6_Rokubacteria
Displaying 15 items

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