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PLM1_60_coex_sep16_scaffold_2957

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_2957_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(215..511)
DNA (297bp) protein (99aa)
Export-related chaperone CsaA bin=GWC2_Methylomirabilis_70_16 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
export-related chaperone CsaA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(562..1707)
DNA (1146bp) protein (382aa)
SpoIID/LytB domain protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cell division protein, SpoIID family
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1707..1934)
DNA (228bp) protein (76aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_2957_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1931..2968)
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWC2_Methylomirabilis_70_24 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Holliday junction ATP-dependent DNA helicase ruvB
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2957_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2982..3530)
DNA (549bp) protein (183aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWC2_Methylomirabilis_70_24 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA recombination protein RuvA domain I
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2957_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3682..3900)
DNA (219bp) protein (73aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC bin=GWC2_Methylomirabilis_70_16 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3914..4666)
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein DAMO_2401 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA-binding regulatory protein, YebC/PmpR family
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4676..5665)
DNA (990bp) protein (330aa)
Thioesterase superfamily protein bin=GWC2_Methylomirabilis_70_16 species=Vulcanisaeta distributa genus=Vulcanisaeta taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thioesterase superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5841..7049
DNA (1209bp) protein (403aa)
Putative acyl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyl-CoA dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2957_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7479..8240)
DNA (762bp) protein (254aa)
Binding-protein-dependent transport system inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ddpC; D-ala-D-ala transporter subunit
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8230..9171)
DNA (942bp) protein (314aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component bin=bin7_NC10_sister species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
dipeptide transport system permease DppB
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9312..10886)
DNA (1575bp) protein (525aa)
ABC-type dipeptide transport system, periplasmic component bin=GWC2_Methylomirabilis_70_16 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC-type dipeptide transport system, periplasmic component
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10883..12523)
DNA (1641bp) protein (547aa)
Oligopeptide/dipeptide ABC transporter, peptide-binding protein bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oligopeptide/dipeptide ABC transporter peptide-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2957_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12878..14068
DNA (1191bp) protein (397aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 14 items

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