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PLM1_60_coex_sep16_scaffold_10565

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_10565_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..840
DNA (840bp) protein (280aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Gordonia paraffinivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_10565_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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859..2871
DNA (2013bp) protein (671aa)
Squalene-hopene cyclase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029U6_SOLUE
squalene-hopene cyclase
Squalene-hopene cyclase {ECO:0000313|EMBL:ABJ82180.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM1_60_coex_sep16_scaffold_10565_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2882..3880)
DNA (999bp) protein (333aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000255|HAMAP-Rule:MF_01676}; EC=1.11.1.15 {ECO:0000255|HAMAP-Rule:MF_01676};; Alkylhydroperoxidase AhpD {ECO:0000255|HAMAP-Rule:MF_01676}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Alkyl hydroperoxide reductase AhpD Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=AHPD_ANADE
alkylhydroperoxidase
PLM1_60_coex_sep16_scaffold_10565_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4020..5153)
DNA (1134bp) protein (378aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
ErfK/YbiS/YcfS/YnhG family protein Tax=Holophaga foetida DSM 6591 RepID=H1P0C4_9BACT bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM1_60_coex_sep16_scaffold_10565_5

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5827..6084
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R821_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KKL75451.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_60_coex_sep16_scaffold_10565_6
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6086..6550)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000365D99D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL92733.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM1_60_coex_sep16_scaffold_10565_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6547..6921)
DNA (375bp) protein (125aa)
N-carbamyl-D-amino acid amidohydrolase bin=GWC2_Methylomirabilis_70_24 species=Thauera sp. 28 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-carbamoyl-D-amino acid hydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_10565_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6918..7382)
DNA (465bp) protein (155aa)
N-carbamyl-D-amino acid amidohydrolase (EC:3.5.-.-)
N-carbamyl-D-amino acid amidohydrolase bin=GWF2_Methylomirabilis_70_14 species=Thauera sp. 28 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_10565_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7396..7731)
DNA (336bp) protein (112aa)
Thioredoxin bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trxA; thioredoxin 1, redox factor
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_10565_10
unknown

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7808..7987
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_10565_11
CSP1_5_NC10, NC10, Bacteria

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7975..8910
DNA (936bp) protein (312aa)
putative small-conductance mechanosensitive ion channel; K03442 small conductance mechanosensitive channel bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative small-conductance mechanosensitive ion channel
Tax=CSP1_5_NC10
Displaying 11 items

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