ggKbase home page

PLM1_60_coex_sep16_scaffold_711_9

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(7046..8299)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 417.0
  • Bit_score: 798
  • Evalue 2.90e-228
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 415.0
  • Bit_score: 643
  • Evalue 3.40e-182
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 417.0
  • Bit_score: 798
  • Evalue 4.10e-228

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGAACCTGTCCGAGCTCAAGGACAAGACCATCACCGATCTCAACAACGTCGCCAAGGAGCTGGGTGTCCAGGGCACCAGCGGCCTTCGCAAGCAGGACCTGATCTTCAAGATCCTGCAGGGGCAGGCCGAGCGCGACGGGCTCATCTTCGCGGAGGGCGTGCTGGAAGTGCTGCCCGACGGCTTCGGCTTCCTCCGCGCGCCGGACTACAACTACCTGCCGGGCCCCGACGACATCTACGTCTCGCCCTCGCAGATCCGGCGCTTCGACCTGCGCACCGGCGACACCATCTCCGGCCAGGTGCGGCCGCCCAAGGACAGCGAGCGCTACTTCGCGCTGCTCAAGGTCGAGGCGATCAACTTCGAGACGCCGGAGCAGGCGCGCGACAAGACGCTCTTCGACAACCTGACCCCGCTCTACCCGATGGAGCGGCTCCGGCTCGAGCACGACTCGGACAACCTGACGACCCGGGCGATGGATCTGCTGTGCCCGATCGGCAAGGGCCAGCGCGGCCTCATCGTGGCGGCCCCGCGCACCGGCAAGACGGTCCTGCTGCAGAACCTCGCCAACGCCATCGCCAAGAACCACCCCGAGGTCTACCTGATCGTGCTGCTCATCGACGAGCGCCCGGAAGAGGTCACCGACATGCAGCGCTCGGTGAAGGGCGAGGTCATCTCCTCCACCTTCGACGAGCCGCCGCAGCGGCACGTGCAGGTGGCGGACATGGTGATCGAGAAGGCCAAGCGCCTGGTCGAGCACAAGCGAGATGTCGTGATCCTGCTCGACTCGATCACCCGCTTCGCCCGCGCCCACAACGCGGTCATCCCGTCCTCCGGCAAGGTGCTCTCGGGCGGTCTCGACGCCAACGCGCTCCAGCGGCCCCGGCGTTTCTTCGCGGCGGCCCGGAACGTGGAGGAGGGCGGCTCGCTCACCATCATGGCCACCGCCCTCATCGACACCGGCTCCCGGATGGACGACGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGGTGCACCTGGACCGGCGCCTGATGGACAAGCGCATCTTCCCGACGATCAATATCGAGCAGACCGGGACCCGGAAGGAAGAGCTCCTGCTGGAGAAGGACGAGCTTCAGAAAGTCTGGCTGCTCCGCAAGGCCCTGTCCCAGCTCAACCCGGTCGAGGCCATGGAGCTGCTGCTGGACAAGCTGAAAATGGTCAAGAGTAACAAGGACTTCCTGAACCAGATGAACCAGCTGGCGTAA
PROTEIN sequence
Length: 418
MNLSELKDKTITDLNNVAKELGVQGTSGLRKQDLIFKILQGQAERDGLIFAEGVLEVLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRFDLRTGDTISGQVRPPKDSERYFALLKVEAINFETPEQARDKTLFDNLTPLYPMERLRLEHDSDNLTTRAMDLLCPIGKGQRGLIVAAPRTGKTVLLQNLANAIAKNHPEVYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPPQRHVQVADMVIEKAKRLVEHKRDVVILLDSITRFARAHNAVIPSSGKVLSGGLDANALQRPRRFFAAARNVEEGGSLTIMATALIDTGSRMDDVIFEEFKGTGNMEVHLDRRLMDKRIFPTINIEQTGTRKEELLLEKDELQKVWLLRKALSQLNPVEAMELLLDKLKMVKSNKDFLNQMNQLA*