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PLM1_60_coex_sep16_scaffold_711

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_711_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(3..578)
DNA (576bp) protein (192aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_711_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(721..1341)
DNA (621bp) protein (207aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_711_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1338..2648)
DNA (1311bp) protein (437aa)
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2645..3364)
DNA (720bp) protein (240aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3361..4617)
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_711_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4617..5546)
DNA (930bp) protein (310aa)
Release factor glutamine methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5543..6613)
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 bin=GWC2_Methylomirabilis_70_16 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptide chain release factor 1
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(6723..6938)
DNA (216bp) protein (72aa)
50S ribosomal protein L31 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L31
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_711_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7046..8299)
DNA (1254bp) protein (418aa)
Transcription termination factor Rho bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rho; transcription termination factor Rho
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_711_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8556..9638)
DNA (1083bp) protein (361aa)
PpiC-type peptidyl-prolyl cis-trans isomerase bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9635..12694)
DNA (3060bp) protein (1020aa)
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-)
Transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13004..13612)
DNA (609bp) protein (203aa)
Redox-sensing transcriptional repressor rex bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rex; redox-sensing transcriptional repressor rex
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_711_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13762..14067)
DNA (306bp) protein (102aa)
ATP synthase subunit C, membrane-bound, F0 sector DCCD-binding (Modular protein) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
F0F1-type ATP synthase, subunit c
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 13 items

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