ggKbase home page

PLM1_60_coex_sep16_scaffold_2532_8

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6272..7963)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide-binding protein AppA bin=GWF2_Methylomirabilis_70_14 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 485.0
  • Bit_score: 770
  • Evalue 1.10e-219
appA; oligopeptide-binding protein AppA similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 545.0
  • Bit_score: 570
  • Evalue 3.70e-160
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 485.0
  • Bit_score: 770
  • Evalue 1.60e-219

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1692
ATGATCGACCTCGACGCTCGACCCGAAGACCCCCGATCCGATTCTCCGTCGCTCTCGCGCCGCGAGATGCTCGGACTGCTCGCGACGACGGGCGCGGGGGCGATGCTGGCACCCATCATCCGGTCCGGCGCCGTGCTCGCCGCGGAGACCCCGAAGAAGGGCGGCCAGATCGTGGTGGCGCTGTCCCAGGAGCCCACCGTCTTCAATCCCAACCGGCCACACATCGAGGTGGATCGCGGTGTCCACTTCGGCCTCTTCGACAGCCTGTGGCGGGTGGACGAGAAAGCCCAGTTCCTCCCCAACCTGGCCGTGGAGATGCCGACCGTGAAGAACGGCGGTATCCAAAAGAACGGCCTCGAGTACCTGGTGAAGCTCCGGAAGGGCGTCAAGTGGCACGACGGCAAGCCGTTCACCTCGAAGGACGTGAAATTCACGCACGAGCTGATCACAAATCCCAAGTTCGGGGCCTACAGCAAGGTGGGGCACGATCAGGTGGCGAGCGTCGAGACGCCCGACGAGTCCACCGTGCGGATCCGACTCAAGGAGCCCTTCGCCCCCTTCATGACGGCGTGGGGCGACACCTACATCATGCCCGCCCACATCCTGGAGGGCGTGGCCGATCCCAACACCGCCGAGTTCAATACCAAGAGCCCGGTGGGCACGGGGCCATTCAGGCTCGGCAGCCGCGTGCCCGGCGACCACCTCCTCCTCGTGGCCAATCCCGCGTACCACCTGGGAGCGCCCGCCCTCGAGCGAGTGATCTTCAAGTACATCCCGGACCTCACGGTCCTGTACACGCAGTTCAAAGGCGGCGCGGTGGACGTGACGGGCATGCAGGGCATCTCGGCCGAGTTCTATAACGAGGCCAAGAGCCTCCCCGGCGTGACGATCCACCTACACTACTCACCCTCGGTGGAATATATCTACTTCAATCACGGCAACCCGAAGTTCAAGGAGCGGGCGGTCCGGCAGGCGCTCTACTACGCGATGGACAAGAAGGCCATCATCGACCAGGTCTACTACGGGCTGCCCAAGCCAGTGGAAGGATACCTGCCGCCCACGTCCTGGGCCTACAACGCCGAGCTGCCCAAGCACGAGTACAACCCCGACAAGGCCAAGCAGATCCTGGAGGAGGCCGGATGGAAGGCGGGCGGCGACGGCGTGCGGGCCAAGGGCGGCGTGCGCCTCTCCTTCACCAACGCCACCACCGCGGGCAACAAGCTCCGCGAGCAGACGCAGGCGCTCGTCCAGCAGAACTGGCGGGCCATCGGCGTGGACATGCAGATCACCAATATGCCGGCCGCCGTGATCTGGGGCGAGTACTACGTGAAGTCCAAGTTCGAGACGCTGCTGGTCGGGATCCAGGCCTCCGTGGGCGACGATCCCGACTGCCTGAACCGCATCCACAGCAAGTACATCGCGGCCAAGACGGGCTCGGGCCGGAACGTGAGCCAGTACGAGAACCCCACGGTCGACAAGCTCCTCGAGGACGGCGTGCGGGAGATTGACCGGGCCAAGCGCCGCGCCATCTATCTCAAGCTCCAGGAGGTGATCCGCACCGACCTCGCGTACCTGCCCATCTTCAGCTACGTGCGCATCGAGGGCGTGAAGCAGGGAATCGTCAACTACACGCCCAACAGCAACACGCTGACGAATAGCTGGAACATGCACGAGTGGGGGTGGAAGGCCTGA
PROTEIN sequence
Length: 564
MIDLDARPEDPRSDSPSLSRREMLGLLATTGAGAMLAPIIRSGAVLAAETPKKGGQIVVALSQEPTVFNPNRPHIEVDRGVHFGLFDSLWRVDEKAQFLPNLAVEMPTVKNGGIQKNGLEYLVKLRKGVKWHDGKPFTSKDVKFTHELITNPKFGAYSKVGHDQVASVETPDESTVRIRLKEPFAPFMTAWGDTYIMPAHILEGVADPNTAEFNTKSPVGTGPFRLGSRVPGDHLLLVANPAYHLGAPALERVIFKYIPDLTVLYTQFKGGAVDVTGMQGISAEFYNEAKSLPGVTIHLHYSPSVEYIYFNHGNPKFKERAVRQALYYAMDKKAIIDQVYYGLPKPVEGYLPPTSWAYNAELPKHEYNPDKAKQILEEAGWKAGGDGVRAKGGVRLSFTNATTAGNKLREQTQALVQQNWRAIGVDMQITNMPAAVIWGEYYVKSKFETLLVGIQASVGDDPDCLNRIHSKYIAAKTGSGRNVSQYENPTVDKLLEDGVREIDRAKRRAIYLKLQEVIRTDLAYLPIFSYVRIEGVKQGIVNYTPNSNTLTNSWNMHEWGWKA*