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PLM1_60_coex_sep16_scaffold_2532

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_2532_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..1596
DNA (1596bp) protein (532aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2532_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1614..2432
DNA (819bp) protein (273aa)
High-affinity phosphate transport protein (ABC superfamily, atp_bind) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pstB; high-affinity phosphate transport protein (ABC superfamily, atp_bind)
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_2532_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2448..3104
DNA (657bp) protein (219aa)
Phosphate transport system protein PhoU bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phoU; phosphate transport system protein PhoU
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2532_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3115..4161
DNA (1047bp) protein (349aa)
Possible lysine decarboxylase family bin=GWF2_Methylomirabilis_70_14 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2532_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4158..4349)
DNA (192bp) protein (64aa)
id=4476363 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_2532_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4423..5325)
DNA (903bp) protein (301aa)
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein bin=GWF2_Methylomirabilis_70_14 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2532_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5322..6284)
DNA (963bp) protein (321aa)
Dipeptide transporter membrane component of ABC superfamily bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2532_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6272..7963)
DNA (1692bp) protein (564aa)
Oligopeptide-binding protein AppA bin=GWF2_Methylomirabilis_70_14 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
appA; oligopeptide-binding protein AppA
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 8 items

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