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PLM1_60_coex_sep16_scaffold_3488_6

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3414..4208)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component I bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 261.0
  • Bit_score: 384
  • Evalue 4.80e-104
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 261.0
  • Bit_score: 248
  • Evalue 1.20e-63
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 253.0
  • Bit_score: 386
  • Evalue 1.80e-104

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 795
GTGCGGCTGCTGCTGACCCCGGCCGTGCTCGTCGTCGCGGTGTTCGCGGTCGCGCTCTCCGCGCTGCTGCGCTACAGCGTGCTCGAGTTCGTGCCGGGGTCACTGCAGACCGGAGGCCTGACGGTCGCGAACTTCACCGGCATCATGAGCCGGCAGTATCTCGGCGCGGTGTGGGACACCCTGGTGCTGAGCGTGGCCACCACCGCGCTGACGCTCGTCGCCTCCTACCCGGTGGCCTACGCGCTCGCGCGCACGCCGTCGGCCCGCGTGCGCTCGGCCCTCCTCGTGCTGACCCTGGCCCCGTTCTTCACCGGGGCCATCGTGCGGACCTACGCCTGGGTGCTGGTCCTGGGCAACACGGTGGTCACCTGGCCGGTGCCGATGCTGTTCACGCCGCGGGGGGTGCTGGTGGGGCTCGTGCACTTCTCGATGCCGACCATGATCCTGCTGCTGGCCGCCGCGATCAGCCACATCGATCCGGTGTACGAGCGCGCGGCGGCCAGCCTGGGCGCGAGCCCGGCCCGCGTGTTCCGGCGCGTGACGCTGCCGCTGTCCCTGCCGGGCATCGTCTCGGGCTCGGTGATCGTCTTCGCCTGGACGCTGAGCGCCTTCGCCACCCCGGAGCTGCTGGGGGGCGGCCGGGTCAAGATGATCGCCAATGTCGTCCGCGACCTGGCGCTGGACTCCTTCAACTGGCCCGGGGGCGCGGCCTTCGCGTTGATGGCGCTGGCGATCACGCTCGCGCTGCTCGCGGGAGCGGGGAAGCTCACCGCGGTCGCCGACCGGGGCGCCTGA
PROTEIN sequence
Length: 265
VRLLLTPAVLVVAVFAVALSALLRYSVLEFVPGSLQTGGLTVANFTGIMSRQYLGAVWDTLVLSVATTALTLVASYPVAYALARTPSARVRSALLVLTLAPFFTGAIVRTYAWVLVLGNTVVTWPVPMLFTPRGVLVGLVHFSMPTMILLLAAAISHIDPVYERAAASLGASPARVFRRVTLPLSLPGIVSGSVIVFAWTLSAFATPELLGGGRVKMIANVVRDLALDSFNWPGGAAFALMALAITLALLAGAGKLTAVADRGA*