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PLM1_60_coex_sep16_scaffold_3488

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3488_1
unknown

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103..588
DNA (486bp) protein (162aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_3488_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(581..1045)
DNA (465bp) protein (155aa)
Decarboxylase Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QZ7_BURXL
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_3488_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1042..1536)
DNA (495bp) protein (165aa)
Putative phosphonopyruvate decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative phosphonopyruvate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_3488_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1533..2612)
DNA (1080bp) protein (360aa)
Sulfate/thiosulfate import ATP-binding protein CysA 2 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. Mg1 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ydcT; spermidine/putrescine ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_3488_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2638..3414)
DNA (777bp) protein (259aa)
Binding--dependent transport system inner membrane component family protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_3488_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3414..4208)
DNA (795bp) protein (265aa)
ABC-type spermidine/putrescine transport system, permease component I bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_3488_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4222..5256)
DNA (1035bp) protein (345aa)
Extracellular solute-binding protein family 1 bin=GWF2_Methylomirabilis_70_14 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_3488_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(5266..5754)
DNA (489bp) protein (163aa)
Aldehyde oxidase small subunit Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN1_THERP
aldehyde oxidase small subunit
Aldehyde oxidase small subunit {ECO:0000313|EMBL:ACM04714.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM1_60_coex_sep16_scaffold_3488_9
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(5751..6620)
DNA (870bp) protein (290aa)
carbon monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
carbon monoxide dehydrogenase medium chain (COdehydrogenase subunit M) (CO-DH M) (EC:1.2.99.2)
Tax=CSP1_3_Armatimonadetes
PLM1_60_coex_sep16_scaffold_3488_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6617..6823)
DNA (207bp) protein (69aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 10 items

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