ggKbase home page

PLM1_60_coex_sep16_scaffold_8225_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(924..1841)

Top 3 Functional Annotations

Value Algorithm Source
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 304.0
  • Bit_score: 335
  • Evalue 1.10e-89
Spermidine synthase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 302.0
  • Bit_score: 539
  • Evalue 1.80e-150
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 302.0
  • Bit_score: 539
  • Evalue 2.50e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCCACGCTCCAGTACAAGTGGTTCTTCGAGACCACGACCCCGGTCGAAGGGCACATGCACGCCATCGCCCGGACCATCGTCACGCGGCAGACCAAGTTCCAGTTCATGGAGATCATGGACACCCACTCGTACGGCAAGTGTCTCGTGCTGGACGGGCGGATCCAGTCGAGCCAGGCCGACGAGTTCATCTACCACGAGACCCTGGTGCACCCGGGCCTCCTGGCCCACCCGCGGCCCCAGCGGGCCATGGTCATCGGCGGGGGCGAGGGGGCCACGGTCCGGGAGATCCTGCGCTACCAGACGATCACCGACTGCCTCATGGTGGACATCGACGGCGAGGTGGTCGAGGAGTGCAAGAAGCACCTGCCCGAGATGCACCAGGGCGCCTTCGACGACCCCCGGACCCGGCTGCTGCACGAGGACGCCCGGGCCTATCTCGAGAAGACCAACGAGCGCTTCGACCTGATCGTGGTGGACCTGGTGGAGCCCCTCGAGGAAGGGCCGGCCTGCCTGCTCTTCACCAAGGAGTTCTACACCCTGATCCGTGACCGGCTGACCGACCAGGGGGTCATGACCATGCAGGCCGGCATGACCAAGGTGAACGAGATCTTCTTCCACGGGGCGGTGAACCGCACGCTCCAGGAAGTCTTCCCGGTGGTCGCGCCGTACCAGAGCTTCATCTCCTGCTTCGGGACCCCGTGGGGCTTCATCCTGGCCTCCAAGGGCACCGACCCCCGGAAGCAGTCCGCCGCCGACATCGACCGCCTCATCGCGGAGCGCTTGAATGCCAAGCAGCTCGGCTACTGGGACGGCAACGCGCATCTGCACTGCTTCAGCCTGCCCAAGTTCCTCCGCGAGTCGATCGAGAAGAACGACCGCGTCATCACCGACAAGAATCCCCTGATCGTTACGTAG
PROTEIN sequence
Length: 306
MATLQYKWFFETTTPVEGHMHAIARTIVTRQTKFQFMEIMDTHSYGKCLVLDGRIQSSQADEFIYHETLVHPGLLAHPRPQRAMVIGGGEGATVREILRYQTITDCLMVDIDGEVVEECKKHLPEMHQGAFDDPRTRLLHEDARAYLEKTNERFDLIVVDLVEPLEEGPACLLFTKEFYTLIRDRLTDQGVMTMQAGMTKVNEIFFHGAVNRTLQEVFPVVAPYQSFISCFGTPWGFILASKGTDPRKQSAADIDRLIAERLNAKQLGYWDGNAHLHCFSLPKFLRESIEKNDRVITDKNPLIVT*