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PLM1_60_coex_sep16_scaffold_8225

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_8225_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..222
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_8225_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(393..584)
DNA (192bp) protein (64aa)
Maf-like protein Desaf_3801 bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
maf protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_8225_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(924..1841)
DNA (918bp) protein (306aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
Spermidine synthase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_8225_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1852..2262)
DNA (411bp) protein (137aa)
S-adenosylmethionine decarboxylase proenzyme bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
S-adenosylmethionine decarboxylase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_8225_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2522..3004
DNA (483bp) protein (161aa)
arginine decarboxylase, pyruvoyl-dependent (EC:4.1.1.19)
Pyruvoyl-dependent arginine decarboxylase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_8225_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3014..3871
DNA (858bp) protein (286aa)
agmatinase (EC:3.5.3.11)
Agmatinase bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_8225_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3978..4679
DNA (702bp) protein (234aa)
Methyltransferase type 11 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase type 11
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_8225_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4764..6083
DNA (1320bp) protein (440aa)
Putative SAM-dependent methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PUA domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 8 items

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