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PLM4_65_b1_redo_sep16_scaffold_3969

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3969_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(202..1188)
DNA (987bp) protein (329aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53168.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Glycosyl transferase group 1 bin=GWC1_Spirochaetes_27_15 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
group 1 glycosyl transferase
PLM4_65_b1_redo_sep16_scaffold_3969_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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1298..2038
DNA (741bp) protein (247aa)
Eukaryotic-type serine/threonine protein kinase (EC:2.7.11.1) bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
protein PASTA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_3969_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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2035..2706
DNA (672bp) protein (224aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_3969_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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2732..3562
DNA (831bp) protein (277aa)
hypothetical protein Tax=Aminicenantes RepID=UPI00036E30FE
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3969_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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3672..4589
DNA (918bp) protein (306aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFA0_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:KDA53329.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3969_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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4853..5113
DNA (261bp) protein (87aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_3969_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(5216..5401)
DNA (186bp) protein (62aa)
preprotein translocase subunit TatA Tax=Desulfospira joergensenii RepID=UPI0003B5308D
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
twin-arginine translocation protein, TatA/E family subunit
PLM4_65_b1_redo_sep16_scaffold_3969_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5425..6390)
DNA (966bp) protein (322aa)
aminoglycoside phosphotransferase bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminoglycoside phosphotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_3969_9
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6566..7189)
DNA (624bp) protein (208aa)
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWA2_Deltaproteobacteria_54_12_curated
PLM4_65_b1_redo_sep16_scaffold_3969_10
unknown

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7298..7837
DNA (540bp) protein (180aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3969_11
R_WOR_2_67_20, WOR-2, Bacteria

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7834..8934
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3041F
thiO; glycine oxidase ThiO
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
PLM4_65_b1_redo_sep16_scaffold_3969_12
RLO_PLX_64_10, Bacteria

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8931..10940
DNA (2010bp) protein (670aa)
MoaA/nifB/pqqE family protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNT9_SORC5
moaA/nifB/pqqE family protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_3969_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10964..11647)
DNA (684bp) protein (228aa)
Phosphoglycerate mutase Tax=Chthoniobacter flavus Ellin428 RepID=B4D0G1_9BACT
Alpha-ribazole-5'-phosphate phosphatase {ECO:0000313|EMBL:EYF07524.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Phosphoglycerate mutase
PLM4_65_b1_redo_sep16_scaffold_3969_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(11644..13035)
DNA (1392bp) protein (464aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-); K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin7_NC10_sister organism_group=NC10
DEAD/DEAH box helicase domain protein
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_3969_15
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13673..15505
DNA (1833bp) protein (611aa)
Elongation factor family GTP-binding protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QM4_SYMTH
elongation factor family GTP-binding protein
Elongation factor family GTP-binding protein {ECO:0000313|EMBL:BAD40019.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM4_65_b1_redo_sep16_scaffold_3969_16
unknown

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comp(15597..15818)
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 16 items

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