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PLM4_65_b1_redo_sep16_scaffold_1096

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1096_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(533..1018)
DNA (486bp) protein (162aa)
Hydrolase, P-loop family Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F062_CLOS4
conserved hypothetical nucleotide-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_1096_2
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1015..2577)
DNA (1563bp) protein (521aa)
Carbohydrate kinase, YjeF related protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R969_AMMDK
carbohydrate kinase
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ACX52848.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
PLM4_65_b1_redo_sep16_scaffold_1096_3
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2574..3272)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZUK1_9PLAN
protein of unknown function DUF2064
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_1096_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(3324..5054)
DNA (1731bp) protein (577aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54468.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
PLM4_65_b1_redo_sep16_scaffold_1096_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

5358..6221
DNA (864bp) protein (288aa)
TPR repeat protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE3_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KDA53005.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1096_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

6249..6983
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53004.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
TonB-like protein; K03832 periplasmic protein TonB bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TonB-like protein
PLM4_65_b1_redo_sep16_scaffold_1096_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

7033..7737
DNA (705bp) protein (235aa)
MotA/TolQ/ExbB proton channel Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029K1_SOLUE
MotA/TolQ/ExbB proton channel
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1096_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

7765..8214
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53002.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
biopolymer ExbD/TolR family transporter
Cell division and transport-associated protein TolR bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
PLM4_65_b1_redo_sep16_scaffold_1096_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

8246..8719
DNA (474bp) protein (158aa)
Biopolymer transporter ExbD Tax=Sorangium cellulosum So0157-2 RepID=S4XL72_SORCE
Uncharacterized protein {ECO:0000313|EMBL:KDA53001.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
biopolymer transporter ExbD
PLM4_65_b1_redo_sep16_scaffold_1096_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8877..11033
DNA (2157bp) protein (719aa)
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
pyrophosphatase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6266B
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_1096_11
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(11030..12160)
DNA (1131bp) protein (377aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen-III oxidase 1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHH1_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KDA53571.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_1096_12
unknown

Not on your lists

comp(12157..13149)
DNA (993bp) protein (331aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1096_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13146..13739)
DNA (594bp) protein (198aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9H0_THEBD
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:GAN45801.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
PLM4_65_b1_redo_sep16_scaffold_1096_14
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(13781..14887)
DNA (1107bp) protein (369aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Acetonema longum DSM 6540 RepID=F7NLF6_9FIRM
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_b1_redo_sep16_scaffold_1096_15
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14884..15846)
DNA (963bp) protein (321aa)
Signal recognition particle receptor FtsY Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NX18_GRAMM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
PLM4_65_b1_redo_sep16_scaffold_1096_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15881..16645)
DNA (765bp) protein (255aa)
SPY protein Tax=Magnetospirillum sp. SO-1 RepID=M2ZR45_9PROT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM4_65_b1_redo_sep16_scaffold_1096_17
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(16672..18405)
DNA (1734bp) protein (578aa)
Metal dependent phosphohydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB4_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KDA53578.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
metal dependent phosphohydrolase
PLM4_65_b1_redo_sep16_scaffold_1096_18
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(18663..19739)
DNA (1077bp) protein (359aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=AROB_ACIC5
Tax=S_OP1_64_32
PLM4_65_b1_redo_sep16_scaffold_1096_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists


comp(19736..21526)
DNA (1791bp) protein (597aa)
Aspartate--tRNA ligase Tax=Geobacillus sp. (strain C56-T3) RepID=D7D2V5_GEOSC
aspartyl-tRNA synthetase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1096_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists


comp(21523..22818)
DNA (1296bp) protein (432aa)
histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Holophaga foetida DSM 6591 RepID=H1P475_9BACT
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1096_21
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22815..23351)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V3B2_9AQUI
transferase
Transferase {ECO:0000313|EMBL:AJE04741.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_b1_redo_sep16_scaffold_1096_22
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(23416..24210)
DNA (795bp) protein (265aa)
Serine/threonine protein kinase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
serine/threonin protein kinase
Tax=RBG_16_KB1_OP1_55_9_curated
PLM4_65_b1_redo_sep16_scaffold_1096_23
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(24342..25775)
DNA (1434bp) protein (478aa)
Serine/threonine protein kinase with TPR repeats Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024X1_SOLUE
serine/threonin protein kinase
Tax=RBG_13_Aminicenantes_63_10_curated
PLM4_65_b1_redo_sep16_scaffold_1096_24
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(25807..26409)
DNA (603bp) protein (201aa)
Putative dsRNA-binding protein, predicted ribosome maturation factor Tax=Candidatus Nitrospira defluvii RepID=D8PG93_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA54620.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
putative dsRNA-binding protein
PLM4_65_b1_redo_sep16_scaffold_1096_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26411..27442)
DNA (1032bp) protein (344aa)
UBA/THIF-type NAD/FAD binding protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B18_SOLUE
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:CDM64274.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UBA/THIF-type NAD/FAD binding protein
PLM4_65_b1_redo_sep16_scaffold_1096_26
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(27439..29109)
DNA (1671bp) protein (557aa)
DNA repair protein RecN Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEP1_CHLTF
DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_1096_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(29176..29964)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037CF28C
acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1096_28
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(30126..31622)
DNA (1497bp) protein (499aa)
Probable cytosol aminopeptidase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=AMPA_PELCD
pepA; cytosolic aminopeptidase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1096_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

31702..32604
DNA (903bp) protein (301aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3B0_SPHTD
PLM4_65_b1_redo_sep16_scaffold_1096_30
unknown

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32712..33359
DNA (648bp) protein (216aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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