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PLM4_65_b1_redo_sep16_scaffold_22958

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_22958_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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2..946
DNA (945bp) protein (315aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_22958_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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943..1788
DNA (846bp) protein (282aa)
pstA; phosphate ABC transporter permease PstA; K02038 phosphate transport system permease protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC phosphate transporter, inner membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_22958_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1785..2639
DNA (855bp) protein (285aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000256|SAAS:SAAS00042365};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] bin=CNBR_ACIDO species=Desulfovibrio oxyclinae genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_22958_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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2639..3346
DNA (708bp) protein (236aa)
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KDA54250.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP
PLM4_65_b1_redo_sep16_scaffold_22958_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3436..5208
DNA (1773bp) protein (591aa)
Sensor protein yycG (EC:2.7.13.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Sensor protein yycG (EC:2.7.13.3)
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_22958_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5205..5876
DNA (672bp) protein (224aa)
Phosphate-specific transport system accessory protein PhoU Tax=Pedosphaera parvula Ellin514 RepID=B9XLG7_9BACT bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
transcriptional repressor for high-affinity phosphate uptake
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_22958_7
unknown

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comp(5975..6247)
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying 7 items

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