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PLM4_65_b1_redo_sep16_scaffold_2036

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2036_1
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2..901)
DNA (900bp) protein (300aa)
BNR repeat-containing protein (Fragment) Tax=Rhodopirellula maiorica SM1 RepID=M5RGL3_9PLAN
BNR repeat-containing protein {ECO:0000313|EMBL:EMI18271.1}; Flags: Fragment;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2036_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(966..2360)
DNA (1395bp) protein (465aa)
amino acid permease bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
rocC; amino acid permease rocC
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2036_3
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

2415..3644
DNA (1230bp) protein (410aa)
aminotransferase bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
class I and II aminotransferase
Tax=RBG_16_Elusimicrobia_66_12_curated
PLM4_65_b1_redo_sep16_scaffold_2036_4
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3743..4795)
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP29_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35511.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM4_65_b1_redo_sep16_scaffold_2036_5
unknown

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4993..5664
DNA (672bp) protein (224aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2036_6
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5675..6580)
DNA (906bp) protein (302aa)
LppY/LpqO family protein Tax=Myxococcus xanthus RepID=Q1DBF3_MYXXD
LppY/LpqO family protein
LppY/LpqO family protein {ECO:0000313|EMBL:ABF89564.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM4_65_b1_redo_sep16_scaffold_2036_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6625..7824)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein bin=GWB1_Spirochaetes_59_5 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2036_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(7902..10277)
DNA (2376bp) protein (792aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y07_SOLUE
serine/threonine protein kinase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2036_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10409..10867
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9FIT6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91886.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM4_65_b1_redo_sep16_scaffold_2036_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10848..11828)
DNA (981bp) protein (327aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
GAF sensor signal transduction histidine kinase Tax=Cystobacter fuscus DSM 2262 RepID=S9NYX0_9DELT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2036_11
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11810..13207)
DNA (1398bp) protein (466aa)
Peptidase M24 Tax=alpha proteobacterium JLT2015 RepID=M2TLI9_9PROT
Peptidase M24 {ECO:0000313|EMBL:EMD82551.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
putative M24B family peptidase
PLM4_65_b1_redo_sep16_scaffold_2036_12
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13302..15563
DNA (2262bp) protein (754aa)
Sulfatase Tax=Pedosphaera parvula Ellin514 RepID=B9XNE3_9BACT
sulfatase
Tax=RBG_16_Gammaproteobacteria_62_13__curated
PLM4_65_b1_redo_sep16_scaffold_2036_13
unknown

Not on your lists

15544..16956
DNA (1413bp) protein (471aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2036_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16937..17635
DNA (699bp) protein (233aa)
DNA-binding response regulator TcrA Tax=Patulibacter medicamentivorans RepID=H0E3K5_9ACTN
DNA-binding response regulator TcrA {ECO:0000313|EMBL:EHN11756.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
two component transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_2036_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17632..19047
DNA (1416bp) protein (472aa)
Two-component histidine kinase PhoR Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZA32_9NOCA
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_2036_16
unknown

Not on your lists

19259..19579
DNA (321bp) protein (107aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2036_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19636..20376
DNA (741bp) protein (247aa)
Predicted permease {ECO:0000313|EMBL:CDM65797.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative permease bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
membrane protein
PLM4_65_b1_redo_sep16_scaffold_2036_18
unknown

Not on your lists

comp(20398..20697)
DNA (300bp) protein (100aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2036_19
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

20716..21210
DNA (495bp) protein (165aa)
DinB family protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFF0_9BACT
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
PLM4_65_b1_redo_sep16_scaffold_2036_20

Not on your lists

comp(21207..21716)
DNA (510bp) protein (170aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000377C0C3
Uncharacterized protein {ECO:0000313|EMBL:AHN97960.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2036_21
unknown

Not on your lists

comp(21743..21880)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2036_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21888..22190)
DNA (303bp) protein (101aa)
peptidase M16 domain protein
Putative M16B family peptidase bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 22 items

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