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PLM4_65_b1_redo_sep16_scaffold_2057

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2057_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..573
DNA (573bp) protein (191aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:CDM65796.1}; EC=1.2.4.2 {ECO:0000313|EMBL:CDM65796.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
2-oxoglutarate dehydrogenase, E1 component Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPJ8_SINAD
2-oxoglutarate dehydrogenase, E1 component
PLM4_65_b1_redo_sep16_scaffold_2057_2
unknown

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comp(581..916)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2057_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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939..1169
DNA (231bp) protein (77aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000382E3C5
Uncharacterized protein {ECO:0000313|EMBL:KIJ74578.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2057_4
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(1182..2045)
DNA (864bp) protein (288aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI00036F40F8
short-chain alcohol dehydrogenase
Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
PLM4_65_b1_redo_sep16_scaffold_2057_5
unknown

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comp(2105..2545)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2057_6
unknown

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comp(2545..2904)
DNA (360bp) protein (120aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2057_7
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(3090..4349)
DNA (1260bp) protein (420aa)
Aldehyde Dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
betaine-aldehyde dehydrogenase
Tax=RBG_16_Planctomycetes_43_13_curated
PLM4_65_b1_redo_sep16_scaffold_2057_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4560..5396)
DNA (837bp) protein (279aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=mine drainage metagenome RepID=E6PI29_9ZZZZ
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_2057_9
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5431..5841)
DNA (411bp) protein (137aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035E457F
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
molybdopterin converting factor subunit 1
PLM4_65_b1_redo_sep16_scaffold_2057_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5842..6087)
DNA (246bp) protein (82aa)
Molybdopterin converting factor, subunit 1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN53_ROSCS
molybdopterin converting factor subunit 1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_2057_11
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6160..6840
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Geobacillus sp. JF8 RepID=S6A405_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT33581.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
PLM4_65_b1_redo_sep16_scaffold_2057_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6837..7835
DNA (999bp) protein (333aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_2057_13
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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7845..8627
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG03_ANADE
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_b1_redo_sep16_scaffold_2057_14
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8686..9366
DNA (681bp) protein (227aa)
TENA/THI-4 protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] bin=BACIGN_2 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
Putative coenzyme PQQ synthesis protein c, putative {ECO:0000313|EMBL:EAW36124.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
TENA/THI-4 protein
PLM4_65_b1_redo_sep16_scaffold_2057_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9503..11410
DNA (1908bp) protein (636aa)
Putative membrane protein bin=GWA2_Elusimicrobia_66_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_2057_16
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

11407..12096
DNA (690bp) protein (230aa)
Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3 Tax=Nitrospina gracilis 3/211 RepID=M1YI11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA54160.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2057_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

12292..13842
DNA (1551bp) protein (517aa)
Amino acid permease-associated region Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QYE9_ISOPI
amino acid permease
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_2057_18
unknown

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14059..14541
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P2I4_9BACT
PLM4_65_b1_redo_sep16_scaffold_2057_19
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14405..15562)
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NBZ7_DESAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB08074.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
PLM4_65_b1_redo_sep16_scaffold_2057_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15570..18140)
DNA (2571bp) protein (857aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_b1_redo_sep16_scaffold_2057_21
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(18137..18841)
DNA (705bp) protein (235aa)
Putative ABC superfamily (Atp&memb) transport protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXN7_THERP
putative ABC superfamily transport protein
Putative ABC superfamily (Atp&memb) transport protein {ECO:0000313|EMBL:ACM05645.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM4_65_b1_redo_sep16_scaffold_2057_22
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

18962..19666
DNA (705bp) protein (235aa)
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
ABC-2 type transporter; K09690 lipopolysaccharide transport system permease protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
ABC transporter
PLM4_65_b1_redo_sep16_scaffold_2057_23

Not on your lists

19663..20910
DNA (1248bp) protein (416aa)
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-antigen export system {ECO:0000313|EMBL:ADC35745.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;"
ABC transporter
PLM4_65_b1_redo_sep16_scaffold_2057_24
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

20898..21677
DNA (780bp) protein (260aa)
hypothetical protein Tax=Fischerella sp. PCC 9339 RepID=UPI0002FB5564
Phosphatidic acid phosphatase {ECO:0000313|EMBL:KIY12922.1}; species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
phosphoesterase PA-phosphatase related protein
PLM4_65_b1_redo_sep16_scaffold_2057_25
unknown

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21632..22102
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying 25 items

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