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PLM4_65_b1_redo_sep16_scaffold_13932

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_13932_1
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(33..2045)
DNA (2013bp) protein (671aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
putative cytochrome-related protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_b1_redo_sep16_scaffold_13932_2
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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comp(2069..2779)
DNA (711bp) protein (237aa)
Putative Cytochrome bc1 complex, cytochrome b6 subunit bin=GWA2_Ignavibacteria_55_11 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
menaquinol-cytochrome c reductase cytochrome b subunit
Tax=RBG_16_Zixibacteria_53_22_curated
PLM4_65_b1_redo_sep16_scaffold_13932_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2776..3546)
DNA (771bp) protein (257aa)
Cytochrome b/b6 domain bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cytochrome b/b6 domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_13932_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3543..4034)
DNA (492bp) protein (164aa)
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1)
2Fe-2S iron sulfur protein bin=GWC2_Ignavibacteria_56_12 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_13932_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4027..5856)
DNA (1830bp) protein (610aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_13932_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5863..6453)
DNA (591bp) protein (197aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_13932_7
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(6465..7730)
DNA (1266bp) protein (422aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_b1_redo_sep16_scaffold_13932_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7908..8240)
DNA (333bp) protein (111aa)
Nitrate/nitrite response regulator protein NarL Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V3G0_9ACTO
two component LuxR family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 8 items

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