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PLM4_65_b1_redo_sep16_scaffold_744_21

Organism: PLM4_65_b1_sep16_Acidobacteria_68_17

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(19660..21324)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 558.0
  • Bit_score: 655
  • Evalue 5.60e-185
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 561.0
  • Bit_score: 561
  • Evalue 7.90e-157
sigma 38, RpoS similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 579.0
  • Bit_score: 559
  • Evalue 8.50e-157

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Taxonomy

Thermoanaerobaculum aquaticum → Thermoanaerobaculum → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
GTGATCGACGAAAAGTACCCGGAGTGCCAGCTCCTCTTCCGAGCGGGGAAGGAGAAAGGCTACCTCCTCTACGAGGAGATCCAGACCATCCTCTCCGACGAACTGGTCGGCAGCCCCCGGGACCTCGAGCAGGTGTACGAGCGCTTCTTCGAGATGGGGATCGAGGTCGTCACCGACCCCGACCGCGCGGCGAGAAAGCGGGCGGCCTTAGACGCGGAGACTGCCGAAGAGGCCCGCGAGGCGGTCGAGAAGACGAACGACCCCGTGCGCATGTACCTGCGCGAGATGGGGACGGTCAAGCTTCTGGATCGCGAGGGCGAGGTCCGCATCGCCAAGCGCATCGAGCAAGGCGAGGCGAAGATCTACCAGGCGCTCGCGAACAATCCGATCGTCCTCGAGGAGATCCTGAAGCTTCTCGAAAACGCGGGCCGCGACTCGCGCATGGTCAACGAGCTCGTGAACATCCCGGAGGACGCCGAGGACCTCGACGACCGCGCCGCGCACCGGATCGAGTCGGTACTCGGGAGCTTCAAGAAGATCGGGGGGCTCGACAAGGACATCAAGCGGATGAAGTTCAAGGCGCGCACCATCAAGAAGGGCACGAAGGCCCTCGCGCGCATCGAAGCTTCCATCGACAAGCGCATCGCCGACATGGCGAAGCTGATCCGCGCCGCCGACTTCACGCCGGCGGTACTCATCCGGGCGATCGGGATCCTGAAGGACATCGACCGGCAGATGAACGTCCCGGAATCCACGATCCGTCAGGACACCAACACGCTCAAGAGGGAAAAGAGCGCCACCCGGATCGACTTCTACAAGCGTCGCATCGCGAAGTACCGCAAGGGCCTCCGCGAGCTCGAGCAGAAGTTCGGCGTTTCGCACGAAGACGTCCGGAAGACGCTTCGGATGGTCCGTGAGGGGGAGGAGGAGGCCGACCAGGCGAAGCACGAGCTCATCGTCGCGAACCTGCGTCTCGTCGTCTCGATCGCCAAGAAGTACACGAACCGCGGACTCCAGTTCCTCGACCTGATCCAGGAGGGGAACATCGGCCTCATGAAGGCGGTCGAGAAGTTCGAGCACCGCCGCGGCTACAAGTTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCGATTACGCGCGCGATCGCGGACCAGGCGCGGACGATCCGGATCCCGGTCCACATGATCGAGACGATCAACAAGCTGACGCGCACGTCCCGCTCGCTCGTGCAGGAGCTCGGGCGCGAGCCCAACGCCGAGGAGATCGCGAAGCGCATGGACATGCCGGTCTCCAAGGTGCGGAAGATCATGAAGATCGCGCAGGAGCCCATCTCTCTCGAAACCCCGATCGGGGAGGAAGAGGATTCGCATCTGGGGGACTTCATCGAAGACCGCCAGGTCCTTTCGCCGATCGACTCCGTTCTCGTCTCGAACCTGCAGGACCAGACGCGCCGGGTCCTGAAGACGCTCACTCCCCGCGAAGAGCAGGTACTGAAGATGCGCTTCGGCGTGGGGGACGGATCGGAGCACACGCTCGAAGAGGTCGGGCGGTCCTTCAACGTGACCCGCGAGCGGATCCGGCAGATCGAATCGAAGGCCCTGAGGAAGCTGAGGCACCCCTCGCGGGCGAAGAAGTTGAAGCCCTTTCTCGAAACGATCCGGTGA
PROTEIN sequence
Length: 555
VIDEKYPECQLLFRAGKEKGYLLYEEIQTILSDELVGSPRDLEQVYERFFEMGIEVVTDPDRAARKRAALDAETAEEAREAVEKTNDPVRMYLREMGTVKLLDREGEVRIAKRIEQGEAKIYQALANNPIVLEEILKLLENAGRDSRMVNELVNIPEDAEDLDDRAAHRIESVLGSFKKIGGLDKDIKRMKFKARTIKKGTKALARIEASIDKRIADMAKLIRAADFTPAVLIRAIGILKDIDRQMNVPESTIRQDTNTLKREKSATRIDFYKRRIAKYRKGLRELEQKFGVSHEDVRKTLRMVREGEEEADQAKHELIVANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVEKFEHRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLTRTSRSLVQELGREPNAEEIAKRMDMPVSKVRKIMKIAQEPISLETPIGEEEDSHLGDFIEDRQVLSPIDSVLVSNLQDQTRRVLKTLTPREEQVLKMRFGVGDGSEHTLEEVGRSFNVTRERIRQIESKALRKLRHPSRAKKLKPFLETIR*