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PLM4_65_b1_redo_sep16_scaffold_744

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_744_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..656)
DNA (654bp) protein (218aa)
Deoxyadenosine kinase / Deoxyguanosine kinase bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
deoxynucleoside kinase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_744_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(681..1553)
DNA (873bp) protein (291aa)
4-hydroxybenzoate polyprenyltransferase, putative Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKQ4_PELPD
prenyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_b1_redo_sep16_scaffold_744_3
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1550..2194)
DNA (645bp) protein (215aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V4V7_TERSS
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PLM4_65_b1_redo_sep16_scaffold_744_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

2598..3062
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54857.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
competence protein ComEA-like protein; K02237 competence protein ComEA bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_744_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3059..3688
DNA (630bp) protein (210aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_744_6
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(3714..4649)
DNA (936bp) protein (312aa)
Nucleoside-diphosphate-sugar pyrophosphorylase family protein bin=GWB2_Deltaproteobacteria_65_81 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
mannose-1-phosphate guanylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM4_65_b1_redo_sep16_scaffold_744_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(4732..5310)
DNA (579bp) protein (193aa)
Adenylate cyclase Tax=Desulfovibrio desulfuricans ND132 RepID=F0JEC9_DESDE
adenylate cyclase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_744_8
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5340..5777)
DNA (438bp) protein (146aa)
GatB/YqeY Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM9_9FIRM
GatB/YqeY {ECO:0000313|EMBL:EEG77235.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_744_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5813..7714
DNA (1902bp) protein (634aa)
Selenocysteine-specific translation elongation factor Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39Q47_GEOMG
selB; selenocysteine-specific translation elongation factor
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_744_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

7838..10171
DNA (2334bp) protein (778aa)
Serine/threonine protein kinase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM4_65_b1_redo_sep16_scaffold_744_11
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10168..10482)
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_68_21_curated
PLM4_65_b1_redo_sep16_scaffold_744_12
Pan troglodytes, Pan, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(10587..11627)
DNA (1041bp) protein (347aa)
Protein tonB2 Tax=Pseudomonas RepID=U9LLN9_PSEAI
Uncharacterized protein {ECO:0000313|Ensembl:ENSPTRP00000017704}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan.;" source="Pan troglodytes (Chimpanzee).;"
Hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_744_13
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11670..14276)
DNA (2607bp) protein (869aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
DNA polymerase Tax=Geobacter sulfurreducens RepID=D7AF95_GEOSK
polA; DNA polymerase I
PLM4_65_b1_redo_sep16_scaffold_744_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14617..15243)
DNA (627bp) protein (209aa)
fcha; methenyltetrahydrofolate cyclohydrolase Fcha (EC:3.5.4.9) bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacteroides xylanisolvens genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
glutamate formiminotransferase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_65_b1_redo_sep16_scaffold_744_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15253..16500)
DNA (1248bp) protein (416aa)
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXZ8_THEOJ
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_744_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16640..17149)
DNA (510bp) protein (170aa)
DivIVA family protein Tax=Myxococcus RepID=F8CMT0_MYXFH
divIVA; cell-division initiation protein DivIVA
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_744_17
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17175..17474)
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5H1_DESIS
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_65_b1_redo_sep16_scaffold_744_18
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(17471..18187)
DNA (717bp) protein (239aa)
Pyridoxal phosphate enzyme, YggS family Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QT90_PERMH
pyridoxal phosphate enzyme, YggS family
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:ACO04752.1}; species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;"
PLM4_65_b1_redo_sep16_scaffold_744_19
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(18184..18612)
DNA (429bp) protein (143aa)
Ribonuclease H bin=GWC2_Proteo_65_14_Ab886 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ribonuclease H
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
PLM4_65_b1_redo_sep16_scaffold_744_20
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(18682..19440)
DNA (759bp) protein (253aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
PLM4_65_b1_redo_sep16_scaffold_744_trna_1
unknown

Not on your lists

comp(19526..19599)
DNA (74bp)
transferRNA Met
PLM4_65_b1_redo_sep16_scaffold_744_21
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(19660..21324)
DNA (1665bp) protein (555aa)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma 38, RpoS
PLM4_65_b1_redo_sep16_scaffold_744_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21351..23171)
DNA (1821bp) protein (607aa)
DNA primase bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA primase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_744_23
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(23295..25175)
DNA (1881bp) protein (627aa)
Endonuclease MutS2 {ECO:0000255|HAMAP-Rule:MF_00092}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00092};; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Endonuclease MutS2 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=MUTS2_THERP
MutS2 family protein
PLM4_65_b1_redo_sep16_scaffold_744_24
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(25700..25912)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 Tax=Holophaga foetida DSM 6591 RepID=H1NYY3_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
rpsU; 30S ribosomal protein S21
PLM4_65_b1_redo_sep16_scaffold_744_25
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

26083..27201
DNA (1119bp) protein (373aa)
Chromosome segregation ATPases-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN57_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KDA54999.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
chromosome segregation ATPase-like protein
PLM4_65_b1_redo_sep16_scaffold_744_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

27255..29420
DNA (2166bp) protein (722aa)
Lytic transglycosylase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lytic transglycosylase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_744_27
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29462..29863
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A200_NATTJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB84805.1}; species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
PLM4_65_b1_redo_sep16_scaffold_744_28
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

29866..31671
DNA (1806bp) protein (602aa)
TrkA-C domain protein Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UAY6_DEIML
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ADV68225.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
PLM4_65_b1_redo_sep16_scaffold_744_29
unknown

Not on your lists

comp(31658..32149)
DNA (492bp) protein (164aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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