ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_30741

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_30741_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1025)
DNA (1023bp) protein (341aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_30741_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1040..2173)
DNA (1134bp) protein (378aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_30741_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2207..2527)
DNA (321bp) protein (107aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Strongly similar to methionyl-tRNA synthetase (Mets) bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_30741_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2664..3089
DNA (426bp) protein (142aa)
Rubrerythrin Tax=Candidatus Nitrospira defluvii RepID=D8P878_9BACT
rbr; rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBK43710.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_30741_5
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3260..3835
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LH23_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY14745.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_65_b1_redo_sep16_scaffold_30741_6
unknown

Not on your lists

comp(3913..4218)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_30741_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4307..4867
DNA (561bp) protein (187aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B77285
AMMECR1 domain-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_30741_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4864..5385
DNA (522bp) protein (174aa)
Zn-dependent hydrolases of the beta-lactamase fold protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKJ0_MOOTA
Zn-dependent hydrolases of the beta-lactamase fold
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_30741_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5382..5615
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 9 items

View Taxonomy