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PLM4_65_b1_redo_sep16_scaffold_10890

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10890_1

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comp(2..376)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035EE941
Uncharacterized protein {ECO:0000313|EMBL:KKK73075.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LysR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_10890_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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496..969
DNA (474bp) protein (158aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10890_3
unknown

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963..1235
DNA (273bp) protein (91aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10890_4
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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1366..2586
DNA (1221bp) protein (407aa)
Putative Na+/H+ exchange protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PGE6_9DELT
putative Na+/H+ exchange protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_b1_redo_sep16_scaffold_10890_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2594..3574)
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10890_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3746..4945
DNA (1200bp) protein (400aa)
Reductive dehalogenase bin=GWD2_Deltaproteobacteria_55_8 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
reductive dehalogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10890_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5008..5256
DNA (249bp) protein (83aa)
Ferredoxin 7Fe (Seven-iron ferredoxin) bin=GWD2_Deltaproteobacteria_55_8 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4Fe-4S ferredoxin
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_10890_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5455..6591
DNA (1137bp) protein (379aa)
Amidohydrolase 2 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10890_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6669..7379)
DNA (711bp) protein (237aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10890_10
unknown

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comp(7389..7631)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10890_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7662..8618)
DNA (957bp) protein (319aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10890_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8642..9754)
DNA (1113bp) protein (371aa)
Amidohydrolase Tax=Prochloron didemni P1-Palau RepID=G0XS52_PRODI
Uncharacterized protein {ECO:0000313|EMBL:ETX04634.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase
PLM4_65_b1_redo_sep16_scaffold_10890_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9833..10063)
DNA (231bp) protein (77aa)
Short-chain dehydrogenase/reductase SDR Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE24_PYRF1
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Displaying 13 items

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