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PLM4_65_b1_redo_sep16_scaffold_8394

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8394_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..830)
DNA (828bp) protein (276aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_8394_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(866..1909)
DNA (1044bp) protein (348aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative TIM-barrel fold metal-dependent hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_8394_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(1959..2999)
DNA (1041bp) protein (347aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_b1_redo_sep16_scaffold_8394_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3128..3499
DNA (372bp) protein (124aa)
Thioesterase superfamily bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thioesterase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_8394_5
unknown

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comp(3558..3719)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8394_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4006..4536
DNA (531bp) protein (177aa)
Cyclic nucleotide-binding:Bacterial regulatory protein, Crp bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glxR; Transcriptional regulator, Crp-family
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_8394_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4545..5771
DNA (1227bp) protein (409aa)
cyclic nucleotide-binding protein bin=bin7_NC10_sister species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
peptidase M50
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_8394_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5863..6867
DNA (1005bp) protein (335aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_8394_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6916..7755
DNA (840bp) protein (280aa)
amidohydrolase 2 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_8394_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7814..9295
DNA (1482bp) protein (494aa)
Hydrolase, alpha/beta hydrolase fold having protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QIS1_9DELT
Hydrolase, alpha/beta hydrolase fold having protein {ECO:0000313|EMBL:EPX61149.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
alpha/beta fold family hydrolase
PLM4_65_b1_redo_sep16_scaffold_8394_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9322..10326
DNA (1005bp) protein (335aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_8394_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10346..10747
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 12 items

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