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PLM4_65_b1_redo_sep16_scaffold_5058

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5058_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3..275
-----------------
DNA (273bp)
protein (91aa)
M16 family peptidase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
peptidase M16 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5058_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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288..1796
-----------------
DNA (1509bp)
protein (503aa)
Peptidase M16 domain protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSJ2_CHLT3
peptidase M16 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5058_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1965..4379
-----------------
DNA (2415bp)
protein (805aa)
Formyl-coenzyme A transferase Tax=Rhodococcus ruber BKS 20-38 RepID=M2Y6Q9_9NOCA
CoA-transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_5058_4
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4443..5054
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QLG5_PSECO
Uncharacterized protein {ECO:0000313|EMBL:ESR00709.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloritidismutans AW-1.;"
DNA-3-methyladenine glycosidase
PLM4_65_b1_redo_sep16_scaffold_5058_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5057..5689)
-----------------
DNA (633bp)
protein (211aa)
Isochorismatase hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
isochorismatase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_5058_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5701..6705)
-----------------
DNA (1005bp)
protein (335aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5058_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6921..7736)
-----------------
DNA (816bp)
protein (272aa)
Enoyl-CoA hydratase/isomerase Tax=Frankia sp. (strain EAN1pec) RepID=A8LD53_FRASN
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_5058_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7860..8864)
-----------------
DNA (1005bp)
protein (335aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium parascrofulaceum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative TIM-barrel fold metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_5058_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8985..10679)
-----------------
DNA (1695bp)
protein (565aa)
Binding-protein-dependent transport systems inner membrane component bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
binding-protein-dependent transport systems inner membrane component
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_5058_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10896..12098)
-----------------
DNA (1203bp)
protein (401aa)
hypothetical protein Tax=Rhodococcus RepID=UPI00037A80D3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5058_11
R_RIF_OP11_02_38_20, RIF-OP11-2, Microgenomates, Bacteria

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12376..13551
-----------------
DNA (1176bp)
protein (392aa)
Putative uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGZ9_HALO1 bin=GWF1_OP11_31_35_complete species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_38_20_curated
PLM4_65_b1_redo_sep16_scaffold_5058_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13668..13979
-----------------
DNA (312bp)
protein (104aa)
Fumarate reductase flavoprotein subunit Tax=uncultured bacterium BLR7 RepID=C0INP0_9BACT
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 12 items

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