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PLM4_65_b1_redo_sep16_scaffold_6562

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6562_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..204)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PWJ1_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB33460.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM4_65_b1_redo_sep16_scaffold_6562_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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515..1525
DNA (1011bp) protein (337aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium parascrofulaceum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6562_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1613..2659
DNA (1047bp) protein (349aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6562_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2894..3502
DNA (609bp) protein (203aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutaredoxin family protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6562_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3677..4657
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E82_MESSB
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6562_6
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4671..5828
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=H9ZZ78_FERFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE47550.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
PLM4_65_b1_redo_sep16_scaffold_6562_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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5832..7268
DNA (1437bp) protein (479aa)
Amidohydrolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6W0_CONWI
amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_6562_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7342..8319)
DNA (978bp) protein (326aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6562_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8357..9523)
DNA (1167bp) protein (389aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TGG3_TISMK
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_6562_10
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9942..10892)
DNA (951bp) protein (317aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase Tax=Burkholderia ambifaria MEX-5 RepID=B1T403_9BURK
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EDT41710.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
PLM4_65_b1_redo_sep16_scaffold_6562_11
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10972..11730)
DNA (759bp) protein (253aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein bin=GWC2_Deltaproteobacteria_66_88 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_65_b1_redo_sep16_scaffold_6562_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11808..12209)
DNA (402bp) protein (134aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

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