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PLM4_65_b1_redo_sep16_scaffold_22557

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_22557_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(1..891)
DNA (891bp) protein (297aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
GDP-L-fucose synthase Tax=Nodosilinea nodulosa RepID=UPI0002E07F76
NAD-dependent epimerase/dehydratase
PLM4_65_b1_redo_sep16_scaffold_22557_2
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(931..2031)
DNA (1101bp) protein (367aa)
Predicted kinase related to galactokinase and mevalonate kinase (EC:2.7.1.168)
Putative galactokinase/mevalonate kinase {ECO:0000313|EMBL:GAN35082.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
kinase; Galactokinase/homoserine kinase family protein, partial bin=GWF2_Geobacter_54_21 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
PLM4_65_b1_redo_sep16_scaffold_22557_3
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2021..3316)
DNA (1296bp) protein (432aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0002EBFCBC
GCD1; nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis
Tax=BJP_IG2102_Desulfovibrionales_64_25
PLM4_65_b1_redo_sep16_scaffold_22557_4
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3347..4096)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI00037356F4
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACD94520.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_65_b1_redo_sep16_scaffold_22557_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4465..5073
DNA (609bp) protein (203aa)
Glycosyl transferase family 2 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_22557_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5404..7764)
DNA (2361bp) protein (787aa)
Organic solvent tolerance protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipopolysaccharide biosynthesis protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_22557_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7761..9074)
DNA (1314bp) protein (438aa)
FolC bifunctional protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FolC bifunctional protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_22557_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9145..9957)
DNA (813bp) protein (271aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Geobacter sp. (strain M21) RepID=TRPA_GEOSM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_22557_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10054..10344)
DNA (291bp) protein (97aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
hypothetical protein Tax=Orenia marismortui RepID=UPI0003650604
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 9 items

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