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PLM4_65_b1_redo_sep16_scaffold_11418

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11418_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..379)
DNA (378bp) protein (126aa)
lon; DNA-binding ATP-dependent protease La, induced by heat shock and other stresses (EC:3.4.21.53)
Lon protease Tax=Hydrocarboniphaga effusa AP103 RepID=I8T517_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_11418_2
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

688..1134
DNA (447bp) protein (149aa)
Heat shock protein Hsp20 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
Heat shock protein Hsp20
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM4_65_b1_redo_sep16_scaffold_11418_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1276..1413
DNA (138bp) protein (46aa)
DNA-directed RNA polymerase subunit omega bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_65_b1_redo_sep16_scaffold_11418_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1507..3129)
DNA (1623bp) protein (541aa)
60 kDa chaperonin 2 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_11418_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3143..3433)
DNA (291bp) protein (97aa)
10 kDa chaperonin bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
groES; co-chaperonin GroES
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_11418_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3549..3944)
DNA (396bp) protein (132aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_11418_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4089..4709
DNA (621bp) protein (207aa)
glutathione S-transferase Tax=Burkholderia sp. JPY347 RepID=UPI0003727956
glutathione S-transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_11418_8
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(4764..6179)
DNA (1416bp) protein (472aa)
Histidine kinase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQZ7_9BURK
histidine kinase
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_11418_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6318..7343)
DNA (1026bp) protein (342aa)
transketolase (EC:1.2.4.1)
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta Tax=Desulfurispora thermophila RepID=UPI00035DDEEA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_11418_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7336..8316)
DNA (981bp) protein (327aa)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CX71_THEYO
AcoA; thiamine pyrophosphate-dependent dehydrogenase, E1 component subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_11418_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8589..9152)
DNA (564bp) protein (188aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 11 items

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