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PLM4_65_b1_redo_sep16_scaffold_7004

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7004_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..313
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0Z4Q1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_7004_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

310..2619
DNA (2310bp) protein (770aa)
Exporters of the RND superfamily Tax=Methyloversatilis universalis FAM5 RepID=F5R9T7_9RHOO
RND efflux transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_7004_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2628..3641
DNA (1014bp) protein (338aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_7004_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3962..4534)
DNA (573bp) protein (191aa)
NUDIX hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Natronococcus jeotgali genus=Natronococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7004_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4619..5275
DNA (657bp) protein (219aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7004_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5278..6510
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B4D18C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7004_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6815..7138)
DNA (324bp) protein (108aa)
id=1773282 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7004_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7138..7929)
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_7004_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8063..8437)
DNA (375bp) protein (125aa)
S23 ribosomal protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRV5_9DELT
S23 ribosomal protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7004_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8513..8716)
DNA (204bp) protein (68aa)
Subunit of meta-cleavage enzyme bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7004_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8841..9704)
DNA (864bp) protein (288aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Pyrobaculum oguniense genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_7004_12
unknown

Not on your lists

comp(9898..10044)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7004_13
unknown

Not on your lists

10454..10603
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7004_14
unknown

Not on your lists

10633..10779
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7004_15
unknown

Not on your lists

11231..11500
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 15 items

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