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PLM4_65_b1_redo_sep16_scaffold_7824

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7824_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..453
DNA (453bp) protein (151aa)
Cobalamin synthesis protein P47K bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cobalamin biosynthesis CobW-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7824_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(602..2032)
DNA (1431bp) protein (477aa)
Putative peptidase family M20/M25/M40 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1C7_9ZZZZ
peptidase M20
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_7824_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2065..2982)
DNA (918bp) protein (306aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7824_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..4829)
DNA (1746bp) protein (582aa)
DNA mismatch repair protein MutL bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA mismatch repair protein MutL
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_7824_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4949..5740
DNA (792bp) protein (264aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7824_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5767..7203)
DNA (1437bp) protein (479aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7824_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7329..7835
DNA (507bp) protein (169aa)
Bifunctional protein HldE bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rfaE bifunctional protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_7824_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7837..8028
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFI0_DESAR
50S ribosomal protein L28
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7824_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8051..10264)
DNA (2214bp) protein (738aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_7824_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10257..10913)
DNA (657bp) protein (219aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_7824_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10910..11152)
DNA (243bp) protein (81aa)
YicC-like domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 11 items

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