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PLM4_65_b1_redo_sep16_scaffold_14106

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_14106_1
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..314)
-----------------
DNA (312bp)
protein (104aa)
Predicted hydrolase or acyltransferase Tax=Gemmata obscuriglobus RepID=UPI00016C4689
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK58851.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
PLM4_65_b1_redo_sep16_scaffold_14106_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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419..685
-----------------
DNA (267bp)
protein (89aa)
putative transmembrane protein Tax=Microbulbifer agarilyticus RepID=UPI000255917E
Uncharacterized protein {ECO:0000313|EMBL:EXI73026.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
protein of unknown function
PLM4_65_b1_redo_sep16_scaffold_14106_3
unknown

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955..1431
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_14106_4

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1538..3838
-----------------
DNA (2301bp)
protein (767aa)
TonB-dependent receptor Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S8C0_PROA2
Uncharacterized protein {ECO:0000313|EMBL:KKN19592.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB-dependent receptor
PLM4_65_b1_redo_sep16_scaffold_14106_5
unknown

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comp(3840..4385)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_14106_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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4542..6200
-----------------
DNA (1659bp)
protein (553aa)
ABC transporter related protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXN9_HALO1 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
heme ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_14106_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6286..7140
-----------------
DNA (855bp)
protein (285aa)
Chromosome partitioning protein transcriptional regulator Soj bin=GWF2_OP3_43_52 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EEP65998.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Cobyrinic acid ac-diamide synthase
PLM4_65_b1_redo_sep16_scaffold_14106_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7162..7833)
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000362A67A
glycosyl hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_14106_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7772..10327)
-----------------
DNA (2556bp)
protein (852aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000362A67A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_14106_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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10494..12815
-----------------
DNA (2322bp)
protein (774aa)
Heavy metal translocating P-type ATPase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C785_MYXFH
heavy metal translocating P-type ATPase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM4_65_b1_redo_sep16_scaffold_14106_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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12815..14044
-----------------
DNA (1230bp)
protein (410aa)
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] bin=CNBR_ACIDO species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_14106_12
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(14060..14770)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQ14_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB11115.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Displaying 12 items

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