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PLM4_65_b1_redo_sep16_scaffold_14500

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_14500_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..645
-----------------
DNA (645bp)
protein (215aa)
Lytic transglycosylase catalytic Tax=Chloroflexus RepID=A9WHU5_CHLAA
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:AKF08835.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
lytic transglycosylase
PLM4_65_b1_redo_sep16_scaffold_14500_2
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

684..1259
-----------------
DNA (576bp)
protein (192aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Methylated-DNA--protein-cysteine methyltransferase Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBZ3_KINRD
methylated-DNA--protein-cysteine methyltransferase
PLM4_65_b1_redo_sep16_scaffold_14500_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1284..2171)
-----------------
DNA (888bp)
protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54636.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein bin=CNBR_ACIDO species=Streptomyces sp. FxanaC1 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_14500_4
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2168..3103)
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS40057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
Glycosyl transferase family 2 bin=GWC2_Elusimicrobia_64_44 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Glycosyl transferase family protein
PLM4_65_b1_redo_sep16_scaffold_14500_5
unknown

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comp(3100..3594)
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_14500_6
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3581..4366)
-----------------
DNA (786bp)
protein (262aa)
Glycosyltransferase domain containing protein Tax=Clostridium acetobutylicum RepID=F0KB80_CLOAE
glycosyltransferase domain-containing protein
Glycosyltransferase domain containing protein {ECO:0000313|EMBL:AAK80283.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
PLM4_65_b1_redo_sep16_scaffold_14500_7
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4378..5127)
-----------------
DNA (750bp)
protein (250aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFK05556.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFK05556.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
Glycosyltransferase, group 2 family protein Tax=delta proteobacterium NaphS2 RepID=D8FFA4_9DELT
Glycosyl transferase, group 2 family protein
PLM4_65_b1_redo_sep16_scaffold_14500_8
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5124..5894)
-----------------
DNA (771bp)
protein (257aa)
Glycosyl transferase, family 2 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASH5_PELPD
glycosyl transferase family protein
Tax=CG_Delta_07
PLM4_65_b1_redo_sep16_scaffold_14500_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(5932..6951)
-----------------
DNA (1020bp)
protein (340aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_14500_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(6948..8054)
-----------------
DNA (1107bp)
protein (369aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B586A1
Uncharacterized protein {ECO:0000313|EMBL:KDA54640.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Glycosyl transferase family 2
PLM4_65_b1_redo_sep16_scaffold_14500_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(8051..8992)
-----------------
DNA (942bp)
protein (314aa)
Glycosyl transferase group 1 Tax=Desulfovibrio sp. FW1012B RepID=G7QA72_9DELT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_14500_12
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9064..9831)
-----------------
DNA (768bp)
protein (256aa)
ABC-2 type transporter Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJ37_9CHRO
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM4_65_b1_redo_sep16_scaffold_14500_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

9926..10300
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein Tax=Clostridium kluyveri RepID=A5MYS3_CLOK5
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_14500_14
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

10312..11205
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54024.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_14500_15
unknown

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11209..12651
-----------------
DNA (1443bp)
protein (481aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_14500_16
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(12686..13675)
-----------------
DNA (990bp)
protein (330aa)
Putative kinase, galactokinase and mevalonate kinase like protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIF0_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:KDA53148.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
putative kinase
PLM4_65_b1_redo_sep16_scaffold_14500_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(13689..15080)
-----------------
DNA (1392bp)
protein (464aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
zinc metalloendopeptidase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_14500_18
Selenomonas sputigena, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(15209..15712)
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein Tax=Thioalkalivibrio sp. AKL11 RepID=UPI0003640A1E
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEC01147.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28).;"
PLM4_65_b1_redo_sep16_scaffold_14500_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(16062..16736)
-----------------
DNA (675bp)
protein (225aa)
RNA polymerase sigma factor Tax=Kineosphaera limosa NBRC 100340 RepID=K6VQC5_9MICO
RNA polymerase sigma 70
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_14500_20
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

16742..17083
-----------------
DNA (342bp)
protein (114aa)
PfkB domain protein Tax=Acetonema longum DSM 6540 RepID=F7NLY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KDA54496.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
rfaE bifunctional protein
Displaying 20 items

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