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PLM4_65_b1_redo_sep16_scaffold_10051

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10051_1
unknown

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1..399
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10051_2
unknown

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comp(447..2267)
-----------------
DNA (1821bp)
protein (607aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10051_3
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2264..3139)
-----------------
DNA (876bp)
protein (292aa)
Polyprenyl synthetase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL48_DESK7
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:AEG15491.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM4_65_b1_redo_sep16_scaffold_10051_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3213..3548)
-----------------
DNA (336bp)
protein (112aa)
Anti-sigma factor antagonist Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZD6_STIAD
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_10051_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3562..4014)
-----------------
DNA (453bp)
protein (151aa)
anti-sigma regulatory factor (EC:2.7.11.1) bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_10051_6
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4073..4921)
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
PLM4_65_b1_redo_sep16_scaffold_10051_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(4930..5187)
-----------------
DNA (258bp)
protein (86aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10051_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5330..6592
-----------------
DNA (1263bp)
protein (421aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.8.6)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:ACO33458.1}; EC=1.3.8.6 {ECO:0000313|EMBL:ACO33458.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
acyl-CoA dehydrogenase Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D5F7A
PLM4_65_b1_redo_sep16_scaffold_10051_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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6589..7575
-----------------
DNA (987bp)
protein (329aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_10051_10
Bifidobacterium actinocoloniiforme, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7591..8079
-----------------
DNA (489bp)
protein (163aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium actinocoloniiforme DSM 22766.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
deoxycytidine triphosphate deaminase Tax=Ornithinimicrobium pekingense RepID=UPI0003B45B40
PLM4_65_b1_redo_sep16_scaffold_10051_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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8194..9324
-----------------
DNA (1131bp)
protein (377aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1NWC4_9BACT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10051_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(9290..9808)
-----------------
DNA (519bp)
protein (173aa)
3-methyladenine DNA glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase bin=GWC2_Chloroflexi_73_18 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
Displaying 12 items

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