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PLM4_65_b1_redo_sep16_scaffold_10117

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10117_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..912)
-----------------
DNA (912bp)
protein (304aa)
Zinc-dependent metalloprotease, MMP subfamily 2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4V8_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK25319.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
PLM4_65_b1_redo_sep16_scaffold_10117_2
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(945..1694)
-----------------
DNA (750bp)
protein (250aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM4_65_b1_redo_sep16_scaffold_10117_3
unknown

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comp(1691..3163)
-----------------
DNA (1473bp)
protein (491aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10117_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(3160..7326)
-----------------
DNA (4167bp)
protein (1389aa)
PAS Tax=delta proteobacterium MLMS-1 RepID=Q1NPM2_9DELT
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10117_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(7323..9008)
-----------------
DNA (1686bp)
protein (562aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
urocanate hydratase
PLM4_65_b1_redo_sep16_scaffold_10117_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9049..9450)
-----------------
DNA (402bp)
protein (134aa)
peptide chain release factor I Tax=alpha proteobacterium L41A RepID=UPI0003796D44
Peptide chain release factor I {ECO:0000313|EMBL:GAO37344.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
class I peptide chain release factor
PLM4_65_b1_redo_sep16_scaffold_10117_7
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9461..9775)
-----------------
DNA (315bp)
protein (105aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
PAS domain S-box (Fragment) Tax=Thauera phenylacetica B4P RepID=N6YLL8_9RHOO
periplasmic sensor hybrid histidine kinase
Displaying 7 items

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