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PLM4_65_b1_redo_sep16_scaffold_10128

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10128_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..1095)
-----------------
DNA (1095bp)
protein (365aa)
Hydrogenase maturation protein HypF Tax=uncultured candidate division OP1 bacterium RepID=H5SSA1_9BACT
(NiFe) hydrogenase maturation protein HypF
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_65_b1_redo_sep16_scaffold_10128_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1108..1479)
-----------------
DNA (372bp)
protein (124aa)
Hydrogenase expression/synthesis HypA Tax=Anaeromyxobacter sp. (strain K) RepID=B4UBT3_ANASK
hydrogenase nickel incorporation protein HypA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_10128_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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1730..2848
-----------------
DNA (1119bp)
protein (373aa)
Hydrogenase small subunit HydA bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
uptake hydrogenase small subunit
Tax=GWF2_Bacteroidetes_41_31_curated
PLM4_65_b1_redo_sep16_scaffold_10128_4
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2860..4578
-----------------
DNA (1719bp)
protein (573aa)
Nickel-dependent hydrogenase large subunit bin=GWF2_Bacteroidetes_41_31 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
cytochrome-c3 hydrogenase
Tax=CG_Ignavi_01
PLM4_65_b1_redo_sep16_scaffold_10128_5
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4589..5275
-----------------
DNA (687bp)
protein (229aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
NiFe hydrogenase small subunit, HupC
Tax=CG_Ignavi_01
PLM4_65_b1_redo_sep16_scaffold_10128_6
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5287..5775
-----------------
DNA (489bp)
protein (163aa)
Hydrogenase maturation protease Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5G6_9SPHI
Ni,Fe-hydrogenase maturation factor
Tax=CG_Ignavi_01
PLM4_65_b1_redo_sep16_scaffold_10128_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5822..6604
-----------------
DNA (783bp)
protein (261aa)
Hydrogenase accessory protein HypB Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7N1_ANADF
hydrogenase nickel incorporation protein HypB
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_65_b1_redo_sep16_scaffold_10128_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

6691..7341
-----------------
DNA (651bp)
protein (217aa)
Deoxyadenosine kinase {ECO:0000313|EMBL:KDA54853.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Deoxynucleoside kinase bin=GWA2_Ignavibacteriae_55_25 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
Deoxynucleoside kinase family protein
PLM4_65_b1_redo_sep16_scaffold_10128_9
unknown

Not on your lists

7582..8178
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10128_10
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8238..8759)
-----------------
DNA (522bp)
protein (174aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Tax=Microcoleus vaginatus FGP-2 RepID=F5UL79_9CYAN
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase {ECO:0000313|EMBL:EGK85575.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
uroporphyrin-III C-methyltransferase
PLM4_65_b1_redo_sep16_scaffold_10128_11
unknown

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9039..9359
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10128_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9395..11827)
-----------------
DNA (2433bp)
protein (811aa)
TPR repeat-containing serine/threonin protein kinase bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
serine/threonin protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_10128_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12100..12963
-----------------
DNA (864bp)
protein (288aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UQA6_9DELT
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_10128_14
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

12960..13805
-----------------
DNA (846bp)
protein (282aa)
Pantothenate synthetase bin=CD_OP8_4m species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
panC; pantoate--beta-alanine ligase
Tax=RIFOXYC12_FULL_TA06_54_24_curated
PLM4_65_b1_redo_sep16_scaffold_10128_15
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13831..14178
-----------------
DNA (348bp)
protein (116aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
aspartate 1-decarboxylase (EC:4.1.1.11)
aspartate decarboxylase Tax=Actinomycetospora chiangmaiensis RepID=UPI000369B545
PLM4_65_b1_redo_sep16_scaffold_10128_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14566..15378
-----------------
DNA (813bp)
protein (271aa)
Thiazole synthase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E9A8_GEOLS
thiG; thiazole synthase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_b1_redo_sep16_scaffold_10128_trna_1
unknown

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15469..15542
-----------------
DNA (74bp)
transferRNA Arg
PLM4_65_b1_redo_sep16_scaffold_10128_trna_2
unknown

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15607..15680
-----------------
DNA (74bp)
transferRNA Arg
PLM4_65_b1_redo_sep16_scaffold_10128_17
unknown

Not on your lists

15820..16224
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B7887D
PLM4_65_b1_redo_sep16_scaffold_10128_18
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16342..17619
-----------------
DNA (1278bp)
protein (426aa)
MscS Mechanosensitive ion channel Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QH75_DESB2
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADK84918.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
PLM4_65_b1_redo_sep16_scaffold_10128_19
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17606..18556
-----------------
DNA (951bp)
protein (317aa)
Pkn10 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NP5_STIAD
Serine/threonine kinase Pkn10 {ECO:0000313|EMBL:KFE70503.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
Ser/Thr protein kinase
Displaying 21 items

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