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PLM4_65_b1_redo_sep16_scaffold_10851

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10851_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(59..1381)
-----------------
DNA (1323bp)
protein (441aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase (EC:3.5.1.108)
UDP-3-O-acyl-N-acetylglucosamine deacetylase bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10851_2
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1450..2841
-----------------
DNA (1392bp)
protein (464aa)
Magnesium transporter Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K049_DESAC
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
magnesium transporter
PLM4_65_b1_redo_sep16_scaffold_10851_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2904..3662
-----------------
DNA (759bp)
protein (253aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA repair protein RecO
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_10851_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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3688..4611
-----------------
DNA (924bp)
protein (308aa)
Glycyl-tRNA synthetase alpha subunit (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit Tax=Megasphaera micronuciformis F0359 RepID=E2ZC39_9FIRM
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10851_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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4604..6823
-----------------
DNA (2220bp)
protein (740aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWI1_ACISM
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10851_6
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6838..7224)
-----------------
DNA (387bp)
protein (129aa)
glyoxalase Tax=Ideonella sp. B508-1 RepID=UPI00034B0938
Glyoxalase {ECO:0000313|EMBL:KFN43044.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Glyoxalase/Bleomycin resistance protein/Dioxygenase family protein
PLM4_65_b1_redo_sep16_scaffold_10851_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7310..7825)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D107D
Protein of unknown function DUF4199
Uncharacterized protein {ECO:0000313|EMBL:AHG91670.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_10851_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7951..8511)
-----------------
DNA (561bp)
protein (187aa)
Transcriptional regulator, LuxR family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMJ7_KORVE
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:AHG91671.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_10851_9
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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8655..9419
-----------------
DNA (765bp)
protein (255aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase Tax=Desulfococcus multivorans DSM 2059 RepID=S7V9D7_DESML
Tax=RBG_16_Chloroflexi_64_43_curated
Displaying 9 items

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