ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_27039

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_27039_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(44..484)
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZF9_CORCM
Protein of unknown function DUF3224
Uncharacterized protein {ECO:0000313|EMBL:AHG89173.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_27039_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(509..697)
-----------------
DNA (189bp)
protein (63aa)
Uncharacterized protein Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XSB0_STAC7
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
PLM4_65_b1_redo_sep16_scaffold_27039_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(765..1694)
-----------------
DNA (930bp)
protein (310aa)
qmcA; putative protease QmcA bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_27039_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1741..2172)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_27039_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2390..2749)
-----------------
DNA (360bp)
protein (120aa)
Cupin 2 conserved barrel domain protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FKE5_STIAD
cupin 2 conserved barrel domain-containing protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADO67918.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_27039_6
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(2993..3244)
-----------------
DNA (252bp)
protein (84aa)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_b1_redo_sep16_scaffold_27039_7
unknown

Not on your lists

comp(3515..3799)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_27039_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4390..4956)
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0C0_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84745.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 8 items

View Taxonomy