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PLM4_65_b1_redo_sep16_scaffold_16832

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_16832_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(2..955)
-----------------
DNA (954bp)
protein (318aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KDA54696.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
UDP-glucose 6-dehydrogenase bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
PLM4_65_b1_redo_sep16_scaffold_16832_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(1114..2151)
-----------------
DNA (1038bp)
protein (346aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Deltaproteobacteria_55_46 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
epimerase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_16832_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(2151..3308)
-----------------
DNA (1158bp)
protein (386aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54702.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Mce family protein bin=GWD2_Deltaproteobacteria_55_8 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Mce family protein
PLM4_65_b1_redo_sep16_scaffold_16832_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3280..4059)
-----------------
DNA (780bp)
protein (260aa)
ABC transporter related protein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QG68_DESB2
ABC transporter
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM4_65_b1_redo_sep16_scaffold_16832_5
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4089..4886)
-----------------
DNA (798bp)
protein (266aa)
Toluene transporter subunit: membrane component of ABC superfamily bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yrbE; toluene ABC transporter subunit membrane protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_16832_6
unknown

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comp(4897..5244)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_16832_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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5321..6184
-----------------
DNA (864bp)
protein (288aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_16832_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

6206..7282
-----------------
DNA (1077bp)
protein (359aa)
Mrp Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI0_THERP
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 8 items

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