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PLM4_65_b1_redo_sep16_scaffold_15656

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_15656_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(2..661)
-----------------
DNA (660bp)
protein (220aa)
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
carbohydrate kinase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_15656_2
unknown

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comp(685..912)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_15656_3
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(909..1355)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WM31_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EOM75084.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_15656_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1352..3142)
-----------------
DNA (1791bp)
protein (597aa)
Putative uncharacterized protein Tax=uncultured bacterium 270 RepID=E3T6T4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA54468.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_15656_5
unknown

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comp(3185..4870)
-----------------
DNA (1686bp)
protein (562aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_15656_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4897..5520)
-----------------
DNA (624bp)
protein (208aa)
Putative oxidoreductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U0_GEMAT
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA {ECO:0000313|EMBL:AHG90345.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_15656_7
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5903..6763)
-----------------
DNA (861bp)
protein (287aa)
hypothetical protein Tax=Porphyrobacter sp. AAP82 RepID=UPI000304E48A
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ETX30134.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
phosphomethylpyrimidine kinase
PLM4_65_b1_redo_sep16_scaffold_15656_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6766..7599)
-----------------
DNA (834bp)
protein (278aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_15656_9
GWC2_SYX_53_9_curated, Bacteria

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7733..9010
-----------------
DNA (1278bp)
protein (426aa)
Magnesium transporter Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2C3_CALAS
mgtE; magnesium transporter
Tax=GWC2_SYX_53_9_curated
PLM4_65_b1_redo_sep16_scaffold_15656_10
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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9007..10422
-----------------
DNA (1416bp)
protein (472aa)
FAD dependent oxidoreductase Tax=uncultured Bacteroidetes bacterium RepID=H5SMT3_9BACT
hypothetical protein containing FAD-bind domain
Tax=RBG_16_Planctomycetes_43_13_curated
PLM4_65_b1_redo_sep16_scaffold_15656_11
RLO_PLX_64_10, Bacteria

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10513..11388
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein bin=GWC2_Deltaproteobacteria_56_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_15656_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11427..12389
-----------------
DNA (963bp)
protein (321aa)
ABC-type transporter, periplasmic subunit family 3 Tax=Thiothrix nivea DSM 5205 RepID=I3BV69_9GAMM
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:EIJ35262.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
peptidoglycan-binding LysM
PLM4_65_b1_redo_sep16_scaffold_15656_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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12479..12712
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein Tax=Thiorhodovibrio sp. 970 RepID=H8YZ15_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_15656_14
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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12709..13101
-----------------
DNA (393bp)
protein (131aa)
Ribonuclease VapC Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETM1_METSB
Twitching motility protein PilT {ECO:0000313|EMBL:KGM44527.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
PilT protein domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_15656_15
unknown

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13098..13259
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

Displaying 15 items

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