ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_26402

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_26402_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

2..541
-----------------
DNA (540bp)
protein (180aa)
putative MFS-type transporter yqjV bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Pontibacter roseus genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
major facilitator superfamily protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_26402_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

542..1669
-----------------
DNA (1128bp)
protein (376aa)
Putative 3-isopropylmalate dehydrogenase Tax=Myxococcus xanthus RepID=Q1DCT3_MYXXD
3-isopropylmalate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_26402_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1690..2931
-----------------
DNA (1242bp)
protein (414aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_26402_4
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

2969..3613
-----------------
DNA (645bp)
protein (215aa)
Beta-lactamase domain protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDF6_RHOM4
beta-lactamase domain-containing protein
Tax=RBG_13_Aminicenantes_62_12_curated
PLM4_65_b1_redo_sep16_scaffold_26402_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

3621..4559
-----------------
DNA (939bp)
protein (313aa)
Tyrosine recombinase XerD Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PDH9_CELJU
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
xerD; tyrosine recombinase XerD
PLM4_65_b1_redo_sep16_scaffold_26402_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4569..5297
-----------------
DNA (729bp)
protein (243aa)
Soluble lytic murein transglycosylase-like protein Tax=Thiorhodovibrio sp. 970 RepID=H8YWI3_9GAMM
lytic transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_26402_7
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5294..5809)
-----------------
DNA (516bp)
protein (172aa)
Serine phosphatase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LL31_SYNFM
serine phosphatase
Serine phosphatase {ECO:0000313|EMBL:ABK18133.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
Displaying 7 items

View Taxonomy