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PLM4_65_b1_redo_sep16_scaffold_26763

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_26763_1
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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2..184
-----------------
DNA (183bp)
protein (61aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
peptide deformylase (EC:3.5.1.88)
peptide deformylase Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B5A85B
PLM4_65_b1_redo_sep16_scaffold_26763_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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212..1642
-----------------
DNA (1431bp)
protein (477aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_b1_redo_sep16_scaffold_26763_3
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1647..2051
-----------------
DNA (405bp)
protein (135aa)
UPF0102 protein STH1475 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Y1475_SYMTH
hypothetical protein
UPF0102 protein STH1475 {ECO:0000255|HAMAP-Rule:MF_00048}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM4_65_b1_redo_sep16_scaffold_26763_trna_1
unknown

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2090..2161
-----------------
DNA (72bp)
transferRNA Gly
PLM4_65_b1_redo_sep16_scaffold_26763_trna_2
unknown

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2211..2282
-----------------
DNA (72bp)
transferRNA Cys
PLM4_65_b1_redo_sep16_scaffold_26763_trna_3
unknown

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2400..2484
-----------------
DNA (85bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_26763_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2748..4040
-----------------
DNA (1293bp)
protein (431aa)
hypothetical protein Magn03007111 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_26763_5
unknown

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comp(4222..5211)
-----------------
DNA (990bp)
protein (330aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_26763_6
unknown

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5511..5768
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

Displaying 9 items

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