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PLM4_65_b1_redo_sep16_scaffold_26935

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_26935_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(3..782)
-----------------
DNA (780bp)
protein (260aa)
PAS domain S-box protein (EC:2.7.13.3)
PAS domain S-box Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFY2_CHLTF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_26935_2
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(770..1321)
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B544F9
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM4_65_b1_redo_sep16_scaffold_26935_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1409..2614)
-----------------
DNA (1206bp)
protein (402aa)
Type II secretion system F domain protein Tax=Holophaga foetida DSM 6591 RepID=H1P2J2_9BACT
Pilus assembly protein PilC {ECO:0000313|EMBL:KDA54490.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
pilC; type IV pilus inner membrane protein PilC
PLM4_65_b1_redo_sep16_scaffold_26935_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(2618..3745)
-----------------
DNA (1128bp)
protein (376aa)
Pilus retraction protein PilT Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI4_CHLTF
pilus retraction protein PilT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_65_b1_redo_sep16_scaffold_26935_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3951..6500)
-----------------
DNA (2550bp)
protein (850aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VY3_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO75300.1}; Glycoprotein X, putative {ECO:0000313|EMBL:EAU64637.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_26935_6
unknown

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comp(6497..7186)
-----------------
DNA (690bp)
protein (230aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_26935_7
RLO_RIF05_58_11, RIF5, Bacteria

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7448..9616
-----------------
DNA (2169bp)
protein (723aa)
sulfatase bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sulfatase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_b1_redo_sep16_scaffold_26935_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9647..10129)
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF03578.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
hypothetical protein bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Displaying 8 items

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