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PLM4_65_b1_redo_sep16_scaffold_307

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_307_29
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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25124..25492
-----------------
DNA (369bp)
protein (123aa)
CutA1 divalent ion tolerance protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNG9_SYNFM
CutA1 divalent ion tolerance protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_307_30
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25523..26683)
-----------------
DNA (1161bp)
protein (387aa)
Cys/Met metabolism PLP-dependent enzyme Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3L4_ACIC5
Cys/Met metabolism PLP-dependent enzyme
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:ACO31777.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM4_65_b1_redo_sep16_scaffold_307_31
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26788..27846
-----------------
DNA (1059bp)
protein (353aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_307_32
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27856..29580)
-----------------
DNA (1725bp)
protein (575aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase Tax=Thiorhodovibrio sp. 970 RepID=H8Z2P7_9GAMM
5`-nucleotidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_307_33
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30145..30753
-----------------
DNA (609bp)
protein (203aa)
RNA polymerase sigma 70 Tax=Salisaeta longa RepID=UPI0003B6720F
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88571.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_307_34
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30795..33659
-----------------
DNA (2865bp)
protein (955aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B58424
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88777.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_307_35
unknown

Not on your lists

33778..34419
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_307_36
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34507..36132
-----------------
DNA (1626bp)
protein (542aa)
FG-GAP repeat-containing protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2E8_MYXSD
Putative integrin-like protein {ECO:0000313|EMBL:KIG15360.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
FG-GAP repeat-containing protein
PLM4_65_b1_redo_sep16_scaffold_307_37
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36174..38021
-----------------
DNA (1848bp)
protein (616aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003634377
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK61958.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
PLM4_65_b1_redo_sep16_scaffold_307_38
unknown

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38280..39059
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_307_39
unknown

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comp(39028..40305)
-----------------
DNA (1278bp)
protein (426aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_307_40
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

40517..41911
-----------------
DNA (1395bp)
protein (465aa)
FG-GAP repeat protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BIT3_CHLPD
hypothetical protein
FG-GAP repeat protein {ECO:0000313|EMBL:ABL66310.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
PLM4_65_b1_redo_sep16_scaffold_307_41
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

42011..43879
-----------------
DNA (1869bp)
protein (623aa)
hypothetical protein Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003789912
hypothetical protein
Tax=GWA2_WOR_2_47_8_curated
PLM4_65_b1_redo_sep16_scaffold_307_42
unknown

Not on your lists

comp(43887..44333)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_307_43
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(44330..45316)
-----------------
DNA (987bp)
protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein Tax=Anaeromusa acidaminophila RepID=UPI000367CBC9
putative TIM-barrel protein, nifR3 family
PLM4_65_b1_redo_sep16_scaffold_307_44
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

45630..47324
-----------------
DNA (1695bp)
protein (565aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
UPF0747 protein DGo_CA1418 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GTL7_DEIGI
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_307_45
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

47425..48153
-----------------
DNA (729bp)
protein (243aa)
LmbE family protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XXT8_9BACT
GlcNAc-PI de-N-acetylase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_307_46
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

48161..49333
-----------------
DNA (1173bp)
protein (391aa)
Glycosyl transferase group 1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0S8_GRAMM
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_307_47
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

49438..49929
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF31E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF11752.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /; LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).;"
PLM4_65_b1_redo_sep16_scaffold_307_48
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

50029..50379
-----------------
DNA (351bp)
protein (117aa)
Putative uncharacterized protein Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DPS1_STAMF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_307_49
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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50381..50707
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Nocardia farcinica genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_307_50
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50742..51098
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI000373E1B2
Uncharacterized protein {ECO:0000313|EMBL:GAC66562.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
hypothetical protein
Displaying items 31-52 of 52 in total

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