| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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PLM4_65_b1_redo_sep16_scaffold_619_1
unknown
|
Not on your lists |
3..107
----------------- DNA (105bp) protein (35aa) |
This feature has no annotations |
|
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PLM4_65_b1_redo_sep16_scaffold_619_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
|
Not on your lists |
comp(221..1984)
----------------- DNA (1764bp) protein (588aa) |
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Proline--tRNA ligase Tax=Geobacter sulfurreducens RepID=SYP_GEOSL
proS; prolyl-tRNA ligase
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PLM4_65_b1_redo_sep16_scaffold_619_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(2012..3883)
----------------- DNA (1872bp) protein (624aa) |
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P3J1_9BACT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
|
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PLM4_65_b1_redo_sep16_scaffold_619_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
|
Not on your lists |
comp(3870..4796)
----------------- DNA (927bp) protein (309aa) |
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KDA53062.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KDA53062.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
mmgB; 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036EAF33
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PLM4_65_b1_redo_sep16_scaffold_619_5
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria
|
Not on your lists |
comp(4871..5890)
----------------- DNA (1020bp) protein (340aa) |
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003808310
Tax=RBG_13_Aminicenantes_62_12_curated
|
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PLM4_65_b1_redo_sep16_scaffold_619_6
unknown
|
Not on your lists |
comp(5853..6518)
----------------- DNA (666bp) protein (222aa) |
This feature has no annotations |
|
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PLM4_65_b1_redo_sep16_scaffold_619_7
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria
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Not on your lists |
comp(6536..7132)
----------------- DNA (597bp) protein (199aa) |
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
RNA polymerase ECF-type sigma factor
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
|
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PLM4_65_b1_redo_sep16_scaffold_619_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(7205..9313)
----------------- DNA (2109bp) protein (703aa) |
Peptidyl-prolyl cis-trans isomerase PpiA protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TM37_9DELT
peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
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PLM4_65_b1_redo_sep16_scaffold_619_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(9377..10120)
----------------- DNA (744bp) protein (248aa) |
metallophosphoesterase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
metallophosphoesterase
Tax=RBG_13_Acidobacteria_68_16_curated
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PLM4_65_b1_redo_sep16_scaffold_619_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
|
Not on your lists |
comp(10108..10623)
----------------- DNA (516bp) protein (172aa) |
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Shikimate kinase Tax=uncultured prokaryote RepID=H5SKV6_9ZZZZ
putative shikimate kinase
|
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PLM4_65_b1_redo_sep16_scaffold_619_11
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
comp(10620..11255)
----------------- DNA (636bp) protein (212aa) |
thiE; thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
Thiamine-phosphate synthase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8J4_ACIC5
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PLM4_65_b1_redo_sep16_scaffold_619_12
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11548..11814
----------------- DNA (267bp) protein (89aa) |
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Z07_STIAD
Uncharacterised protein {ECO:0000313|EMBL:CRE09403.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
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PLM4_65_b1_redo_sep16_scaffold_619_13
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
|
Not on your lists |
comp(12553..13035)
----------------- DNA (483bp) protein (161aa) |
Acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=uncultured prokaryote RepID=H5SKV8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KDA52985.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
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PLM4_65_b1_redo_sep16_scaffold_619_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(13043..13399)
----------------- DNA (357bp) protein (119aa) |
Putative distant relative of homeotic protein bithoraxoid Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIR2_CHLTF
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
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PLM4_65_b1_redo_sep16_scaffold_619_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(13389..14693)
----------------- DNA (1305bp) protein (435aa) |
Tetratricopeptide TPR_2 repeat protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEW1_ANASK
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
|
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PLM4_65_b1_redo_sep16_scaffold_619_16
RBG_13_OP8X_37_8_curated, OP8X, Bacteria
|
Not on your lists |
comp(14864..15787)
----------------- DNA (924bp) protein (308aa) |
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell surface protein
Tax=RBG_13_OP8X_37_8_curated
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PLM4_65_b1_redo_sep16_scaffold_619_17
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15928..17595)
----------------- DNA (1668bp) protein (556aa) |
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8A7_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM89854.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
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PLM4_65_b1_redo_sep16_scaffold_619_18
unknown
|
Not on your lists |
comp(17614..18159)
----------------- DNA (546bp) protein (182aa) |
This feature has no annotations |
|
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PLM4_65_b1_redo_sep16_scaffold_619_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(18182..20839)
----------------- DNA (2658bp) protein (886aa) |
Type II and III secretion system protein Tax=uncultured prokaryote RepID=H5SKW3_9ZZZZ
type II and III secretion system protein
Tax=RBG_13_Acidobacteria_68_16_curated
|
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PLM4_65_b1_redo_sep16_scaffold_619_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(20883..21404)
----------------- DNA (522bp) protein (174aa) |
Type IV pilus assembly protein PilP Tax=uncultured prokaryote RepID=H5SKW4_9ZZZZ
Tax=RBG_13_Acidobacteria_68_16_curated
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PLM4_65_b1_redo_sep16_scaffold_619_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(21410..22036)
----------------- DNA (627bp) protein (209aa) |
Type IV pilus assembly protein PilO Tax=uncultured prokaryote RepID=H5SKW5_9ZZZZ
pilus assembly protein PilO
Tax=RBG_13_Acidobacteria_68_16_curated
|
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| PLM4_65_b1_redo_sep16_scaffold_619_22 |
Not on your lists |
comp(22049..22756)
----------------- DNA (708bp) protein (236aa) |
Type IV pilus assembly protein PilN Tax=uncultured prokaryote RepID=H5SKW6_9ZZZZ
Type IV pilus assembly protein PilN {ECO:0000313|EMBL:BAL56802.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
|
|
| PLM4_65_b1_redo_sep16_scaffold_619_23 |
Not on your lists |
comp(22762..23817)
----------------- DNA (1056bp) protein (352aa) |
Type IV pilus assembly protein PilM Tax=uncultured prokaryote RepID=H5SKW7_9ZZZZ
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:BAL56803.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
pilM; type IV pilus biogenesis ATPase PilM
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PLM4_65_b1_redo_sep16_scaffold_619_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
24086..24319
----------------- DNA (234bp) protein (78aa) |
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosomal protein L28
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
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PLM4_65_b1_redo_sep16_scaffold_619_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(24363..26603)
----------------- DNA (2241bp) protein (747aa) |
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC0_KORVE
(p)ppGpp synthetase SpoT/RelA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
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PLM4_65_b1_redo_sep16_scaffold_619_26
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
|
Not on your lists |
comp(26705..27910)
----------------- DNA (1206bp) protein (402aa) |
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035DC6CA
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
protein-export membrane protein SecF
|
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| PLM4_65_b1_redo_sep16_scaffold_619_27 |
Not on your lists |
comp(27947..29530)
----------------- DNA (1584bp) protein (528aa) |
Preprotein translocase subunit SecD Tax=uncultured prokaryote RepID=H5SKX1_9ZZZZ
Preprotein translocase subunit SecD {ECO:0000313|EMBL:BAL56807.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
protein-export membrane protein SecD
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PLM4_65_b1_redo_sep16_scaffold_619_28
GWA2_OP3_52_12_curated, Omnitrophica, Bacteria
|
Not on your lists |
comp(29527..29862)
----------------- DNA (336bp) protein (112aa) |
preprotein translocase subunit YajC Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B653C5
preprotein translocase subunit YajC
Tax=GWA2_OP3_52_12_curated
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PLM4_65_b1_redo_sep16_scaffold_619_29
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29933..31087)
----------------- DNA (1155bp) protein (385aa) |
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
Queuine tRNA-ribosyltransferase Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q749X3_GEOSL
tgt-2; queuine tRNA-ribosyltransferase
|
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PLM4_65_b1_redo_sep16_scaffold_619_30
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(31103..31882)
----------------- DNA (780bp) protein (260aa) |
Outer membrane lipoprotein carrier protein LolA Tax=uncultured prokaryote RepID=H5SKX4_9ZZZZ
outer membrane lipoprotein-sorting protein
Tax=RBG_13_Acidobacteria_68_16_curated
|